Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5216 |
Symbol | ppx |
ID | 1042408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5949275 |
End bp | 5950777 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148615 |
Product | Ppx/GppA phosphatase |
Protein accession | NP_747317 |
Protein GI | 26991892 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCATA CCATCGCGAA GAACCTGTCC CTGATCGCCG CCATCGACCT TGGCTCCAAC AGTTTTCACA TGGTCGTGGC CAAGGCCCAC CATACCGAAA TCCGTATCCT TGAGCGGCTC GGCGAGAAGG TTCAACTGGC CGCCGGCATC GACGAAGAGC GCATGCTCAG TGAAGAGGCA ATGGAAAGGG GCCTGGATTG CCTCAAGCGC TTTTCCCAGC TGATCAACGG CATGCCGGCA GGCGCCGTGC GTATCGTCGG TACCAACGCC TTGCGCGAAG CGCGCAACCG TAACGAATTC ATCCAGCGCG CCGAAGCCAT CCTCGGCCAC CCGGTGGAGG TCATCTCTGG CCGTGAAGAG GCGCGCCTGA TCTACCTGGG CGTGTCGCAC ACCCTGGCCG ACACACCCGG CAAGCGCCTG GTGGCCGACA TCGGCGGCGG CAGTACCGAA TTCATCATTG GCCAGCGCTT CGAGCCGCTG CTGCGCGAAA GCCTGCAGAT GGGTTGCGTG AGCTTTACCC AGCGCTATTT CCGCGACGGC AAGATCACCC CGGCCCGCTA TGCCCAGGCC TACACTGCCG CACGCCTGGA ACTGATGAGC ATCGAAAATG CCCTGCACCG CCTGACCTGG GATGAGGCTA TCGGCTCATC CGGCACCATT CGCGCCATCG GCGCGGCCAT CAAGGCCGGC GGCCTGGGCA ATGGCGAGGT CAACGCCGAA GGCCTGGCCT GGGTCAAACG CAAGCTGTTC AAGCTGGGCG AAGTCGACAA GATCGACTTC GACGGCGTCA AACCAGACCG CCGCGCTATC TTCCCGGCGG GCTTGGCGAT TCTCGAAGCG ATCTTCGATG CCCTTGAACT GAACCGCATG GACCACTGCG ACGGCGCCCT GCGCGAAGGT GTGCTGTTCG ATCTGCTTGG CCGCCACCAC CACGAAGACG TGCGCGAACG CACCCTGAAC TCGCTGATGG AGCGCTATCA CGTGGACCAG GGCCAGGCTG CGCGCGTCGA GCGCAAGGCG TTGCACGCAT TCGACCAGGT GGCCGACGCT TGGAACCTGA AAGACGGAAA CTGGCGCGAT CTACTGGGCT GGGCCGCGAA AGTGCACGAA ATCGGGCTGG ACATTGCCCA TTATCACTAC CACAAGCACG GCGCCTATCT GATCGAGCAC TCGGACCTGG CAGGCTTTTC CCGGGAAGAT CAGCAGATGA TGGCCCTGCT GGTACGCGGC CACCGCCGCA ACATCCCCAA GGACCGTTAC GCCGAACTGG GTGATGAAGG GGTCAAGCTG CTGCGCCTGT GCGTATTGCT GCGCTTTGCC ATCCTGTTCC ACCACATCCG CGGCACCCAG CAGATGCCAA CGGTAGAACT GCACGGCGGG GACAACAGCC TGGATGTAGC CTTCCCTGAA GGTTGGCTGC AGCAGAACCA GCTGACCCAG GCCGACTTCG CCAACGAGGC GGAGTGGCTG GCCCGGGTCG GCTTCGTCCT CAGCGTACGT TGA
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Protein sequence | MPHTIAKNLS LIAAIDLGSN SFHMVVAKAH HTEIRILERL GEKVQLAAGI DEERMLSEEA MERGLDCLKR FSQLINGMPA GAVRIVGTNA LREARNRNEF IQRAEAILGH PVEVISGREE ARLIYLGVSH TLADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFRDG KITPARYAQA YTAARLELMS IENALHRLTW DEAIGSSGTI RAIGAAIKAG GLGNGEVNAE GLAWVKRKLF KLGEVDKIDF DGVKPDRRAI FPAGLAILEA IFDALELNRM DHCDGALREG VLFDLLGRHH HEDVRERTLN SLMERYHVDQ GQAARVERKA LHAFDQVADA WNLKDGNWRD LLGWAAKVHE IGLDIAHYHY HKHGAYLIEH SDLAGFSRED QQMMALLVRG HRRNIPKDRY AELGDEGVKL LRLCVLLRFA ILFHHIRGTQ QMPTVELHGG DNSLDVAFPE GWLQQNQLTQ ADFANEAEWL ARVGFVLSVR
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