Gene PP_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5216 
Symbolppx 
ID1042408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5949275 
End bp5950777 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID637148615 
ProductPpx/GppA phosphatase 
Protein accessionNP_747317 
Protein GI26991892 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATA CCATCGCGAA GAACCTGTCC CTGATCGCCG CCATCGACCT TGGCTCCAAC 
AGTTTTCACA TGGTCGTGGC CAAGGCCCAC CATACCGAAA TCCGTATCCT TGAGCGGCTC
GGCGAGAAGG TTCAACTGGC CGCCGGCATC GACGAAGAGC GCATGCTCAG TGAAGAGGCA
ATGGAAAGGG GCCTGGATTG CCTCAAGCGC TTTTCCCAGC TGATCAACGG CATGCCGGCA
GGCGCCGTGC GTATCGTCGG TACCAACGCC TTGCGCGAAG CGCGCAACCG TAACGAATTC
ATCCAGCGCG CCGAAGCCAT CCTCGGCCAC CCGGTGGAGG TCATCTCTGG CCGTGAAGAG
GCGCGCCTGA TCTACCTGGG CGTGTCGCAC ACCCTGGCCG ACACACCCGG CAAGCGCCTG
GTGGCCGACA TCGGCGGCGG CAGTACCGAA TTCATCATTG GCCAGCGCTT CGAGCCGCTG
CTGCGCGAAA GCCTGCAGAT GGGTTGCGTG AGCTTTACCC AGCGCTATTT CCGCGACGGC
AAGATCACCC CGGCCCGCTA TGCCCAGGCC TACACTGCCG CACGCCTGGA ACTGATGAGC
ATCGAAAATG CCCTGCACCG CCTGACCTGG GATGAGGCTA TCGGCTCATC CGGCACCATT
CGCGCCATCG GCGCGGCCAT CAAGGCCGGC GGCCTGGGCA ATGGCGAGGT CAACGCCGAA
GGCCTGGCCT GGGTCAAACG CAAGCTGTTC AAGCTGGGCG AAGTCGACAA GATCGACTTC
GACGGCGTCA AACCAGACCG CCGCGCTATC TTCCCGGCGG GCTTGGCGAT TCTCGAAGCG
ATCTTCGATG CCCTTGAACT GAACCGCATG GACCACTGCG ACGGCGCCCT GCGCGAAGGT
GTGCTGTTCG ATCTGCTTGG CCGCCACCAC CACGAAGACG TGCGCGAACG CACCCTGAAC
TCGCTGATGG AGCGCTATCA CGTGGACCAG GGCCAGGCTG CGCGCGTCGA GCGCAAGGCG
TTGCACGCAT TCGACCAGGT GGCCGACGCT TGGAACCTGA AAGACGGAAA CTGGCGCGAT
CTACTGGGCT GGGCCGCGAA AGTGCACGAA ATCGGGCTGG ACATTGCCCA TTATCACTAC
CACAAGCACG GCGCCTATCT GATCGAGCAC TCGGACCTGG CAGGCTTTTC CCGGGAAGAT
CAGCAGATGA TGGCCCTGCT GGTACGCGGC CACCGCCGCA ACATCCCCAA GGACCGTTAC
GCCGAACTGG GTGATGAAGG GGTCAAGCTG CTGCGCCTGT GCGTATTGCT GCGCTTTGCC
ATCCTGTTCC ACCACATCCG CGGCACCCAG CAGATGCCAA CGGTAGAACT GCACGGCGGG
GACAACAGCC TGGATGTAGC CTTCCCTGAA GGTTGGCTGC AGCAGAACCA GCTGACCCAG
GCCGACTTCG CCAACGAGGC GGAGTGGCTG GCCCGGGTCG GCTTCGTCCT CAGCGTACGT
TGA
 
Protein sequence
MPHTIAKNLS LIAAIDLGSN SFHMVVAKAH HTEIRILERL GEKVQLAAGI DEERMLSEEA 
MERGLDCLKR FSQLINGMPA GAVRIVGTNA LREARNRNEF IQRAEAILGH PVEVISGREE
ARLIYLGVSH TLADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFRDG
KITPARYAQA YTAARLELMS IENALHRLTW DEAIGSSGTI RAIGAAIKAG GLGNGEVNAE
GLAWVKRKLF KLGEVDKIDF DGVKPDRRAI FPAGLAILEA IFDALELNRM DHCDGALREG
VLFDLLGRHH HEDVRERTLN SLMERYHVDQ GQAARVERKA LHAFDQVADA WNLKDGNWRD
LLGWAAKVHE IGLDIAHYHY HKHGAYLIEH SDLAGFSRED QQMMALLVRG HRRNIPKDRY
AELGDEGVKL LRLCVLLRFA ILFHHIRGTQ QMPTVELHGG DNSLDVAFPE GWLQQNQLTQ
ADFANEAEWL ARVGFVLSVR