| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5143 |
|---|
| Symbol | |
|---|
| ID | 1042596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5868571 |
|---|
| End bp | 5869353 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637148542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747244 |
|---|
| Protein GI | 26991819 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.161366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.891467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG TGCTCTATCT GTTGTTGGGC GCCTGTGCCG GTGTGCTGGC CGGGCTGTTC
GGCGTGGGCG GCGGCATCAT CATCGTGCCG GTGCTGGTGT TCAGCTTTAC CCTGCAGGGT
TTCGACGCTT CGGTGCTGAC TCACCTGGCC GTCGGCACGT CTTTGGCCAC CATCGTCTTC
ACTTCGATTA ACGCCGTGCG GGAGCACCAC CGCAAGCGCG CGGTGCAATG GCCGATCTTC
ATCTGGATGA CCATCGGCAT CCTCCTGGGG GCCGGTGTCG GTGCCAAGAC CGCTTCGCTG
ATCCAGGGGC CACTGCTGCA AAAGATCATC GGTGTGTTCG CCCTGGTCAT CGCCGCGCAG
ATGGCCCTTG ACCTCAAACC CAAGGCCAGC CGTGGCGTCC CCGGCAAACC TGGGCTGATC
GGTGCAGGTG GCGTGATTGG CTGGGCCTCG GCCATTTTCG GCATTGGCGG TGGTTCGCTG
ACGGTGCCGT TCCTCACCTG GCGTAGCCTG CCCATGCAGC AGGCAGTGGC CACGTCATCG
GCCTGTGGCC TGCCGATTGC TGTGGCCAGT GCCCTGAGCT TCATGCTGCT GGGTTGGCAC
GAGGAGCACC TGCCGCCCCA CAGCCTGGGT TACGTGTACC TGCCGGCGCT GGTCGGCATT
GCCGTGACCA GCATGTTCTT CGCCCGCTTC GGCGCGCGCC TGGCGCACAA GCTGTCGCCC
CGTTTGTTGA AACGCCTGTT CGCAGCCCTG TTGTTCTGTG TTGGCCTCAG CTTTTTGATT
TGA
|
|---|
| Protein sequence | MEFVLYLLLG ACAGVLAGLF GVGGGIIIVP VLVFSFTLQG FDASVLTHLA VGTSLATIVF
TSINAVREHH RKRAVQWPIF IWMTIGILLG AGVGAKTASL IQGPLLQKII GVFALVIAAQ
MALDLKPKAS RGVPGKPGLI GAGGVIGWAS AIFGIGGGSL TVPFLTWRSL PMQQAVATSS
ACGLPIAVAS ALSFMLLGWH EEHLPPHSLG YVYLPALVGI AVTSMFFARF GARLAHKLSP
RLLKRLFAAL LFCVGLSFLI
|
|---|
| |