Gene PP_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5139 
SymbolcadA-2 
ID1041793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5863889 
End bp5866141 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content65% 
IMG OID637148538 
Productheavy metal translocating P-type ATPase 
Protein accessionNP_747240 
Protein GI26991815 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.921896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CTGTCAGCCA CGAACACAAG CATCCGCACG ATCACGCTCA TGGTGATGAC 
GACCATGGCC ATGCTGCCCA CGGCCACAGC TGCTGCGGCG CCAAAGCCGC GCCGCCGCTG
GTGCAACTGA GCGAAACGGC CAGTGCCCAG GCACAACTCA GTCGTTTCCG CATCGAGGCC
ATGGACTGCC CCACCGAGCA GACCCTGATC CAGGACAAAC TGAGCAAGCT GGCCGGTATC
GAACAGCTGG AATTCAACCT GATCAACCGC GTGCTTGGCG TGCGCCACAC CCTGGACGGC
ACCGCCGATA TCGAGCGGGC GATCGACAGC CTGGGCATGA AGGCCGAGCC GATAGCGGCC
CAGGACGACG GCAGTGCCAG CGTGCCACAA CCGGCCAAGG CCCACTGGTG GCCACTGGCA
TTGTCGGGCG TCGCCGCGAT CGCCGCCGAA ATCGTGCACT TTGCTGCACT GGCCCCTGAG
TGGGTGGTGG CGGGGCTGGC GCTTGCCGCG ATCCTCGGTT GCGGCCTGGG TACCTACAAG
AAGGGCTGGA TTGCCCTGAA AAACCGGAAC CTCAACATCA ATGCGCTGAT GAGTATCGCC
GTGACGGGGG CCGTATTGAT CGGCCAGTGG CCGGAAGCGG CTATGGTGAT GGTGCTGTTC
ACCGTTGCCG AACTGATCGA AGCGCGCTCG CTGGACCGTG CGCGCAATGC CATTGGCGGG
TTGATGCAGC TGACCCCGGA CATGGCCACG GTGCAGCAGG CCGATGGCCA GTGGCGCGAG
CTGGACGTGC GTGAGGTGGC CATCGGCGCA CTGGTGCGGG TGCGCCCCGG TGAGCGCATC
GGACTGGACG GTGAAGTGAC CCGCGGGCAA TCCAGCGTCG ATCAGGCGCC GATTACCGGT
GAAAGCCTGC CTGTGGAGAA GGGGGTGGGT GACAAGCTGT TCGCTGGCAC CATCAACCAG
GCGGGGGCGC TGGAGTTTCG CGTCACCGCC GCTGCCGGGC AGTCGACCCT GGCGCGGATC
ATCAAGGCGG TGGAGGAAGC GCAAGGCGCG CGGGCGCCTA CCCAGCGCTT TGTCGACCGT
TTTTCGCGCA TCTACACCCC GGTGGTGTTC GCCATCGCCT TGGCCGTGGC GCTGATACCA
CCGCTGTTCC TGGCTGGCGC CTGGTTCGAC TGGGTTTACC GCGCCTTGGT GCTGCTGGTG
GTGGCCTGCC CGTGCGCGCT GGTGATCTCG ACCCCGGTGA CCATCGTCAG TGGCCTGGCC
GCCGCCGCGC GCAAAGGCAT CCTGATCAAG GGTGGCGTGT ACCTGGAGGG TGGCCGCCAC
CTTGATTTCC TGGCCCTGGA CAAGACCGGC ACCATCACCC ATGGCAAGCC GGTGCAGACC
GACGCCAAGG TGCTGGCGCC GCTGTTCGAA GACCGTGCGC AAGCCTTGGC GGCCAGCCTG
GGCGAGCGTT CGGACCACCC GGTGTCCCGC GCCATTGCCG AGTTCGGCAA GCAGCAAGGC
CTGGCCTTGA GCGAGGTCAG TGACTTCGTT GCGCTGGCCG GGCGTGGCGT GCGTGGCGTC
ATTGCCGGTG AGGTCTACCA CTTGGGCAAC CACCGCCTGG TCGAGGAGCT GGGGCTGTGT
TCGCCAGCGC TGGAGGCCCA ACTGGATGCG CTGGAGCGCC AGGGCAAGAC CGTGGTCCTG
CTGCTTGACC GCTCCGGGCC ACTGGCACTG TTCGCCGTGG CCGACACGGT CAAGGACAGC
AGCCGTCAGG CGATCGCCGA ATTGCATCAG CTGGGTATCA AGACTGTCAT GCTGACCGGT
GACAATCCGC ATACTGCGCA GGCCATTGCT GCCGTGGTGG GAATCGACCG CGCCGAGGGC
AACCTGTTGC CGGCCGACAA GCTGAAAACC ATTGAGGCGT TGTACGCACA AGGCCATCGG
GTGGGCATGG TCGGTGACGG CATCAACGAC GCCCCGGCGC TGGCCCGCGC CGAAATCGGT
TTTGCCATGG CTGCTGCCGG CACCGACACC GCCATCGAGA CGGCCGATGT GGCGCTGATG
GACGATGACT TGCGCAAAAT CCCGGCCTTC GTCAGGCTGT CGCGCCAAAG TGCGGCGATC
CTCATGCAGA ACATCGTGCT GGCGTTGGGC ATCAAGGCGA TATTTCTGGC GATCACCTTC
GCCGGCATGG CCACGATGTG GATGGCGGTG TTCGCTGATA TGGGCGTGAG CTTGCTGGTG
GTGTTCAACG GCTTGCGCCT TTTGCGCAAA TAG
 
Protein sequence
MNQPVSHEHK HPHDHAHGDD DHGHAAHGHS CCGAKAAPPL VQLSETASAQ AQLSRFRIEA 
MDCPTEQTLI QDKLSKLAGI EQLEFNLINR VLGVRHTLDG TADIERAIDS LGMKAEPIAA
QDDGSASVPQ PAKAHWWPLA LSGVAAIAAE IVHFAALAPE WVVAGLALAA ILGCGLGTYK
KGWIALKNRN LNINALMSIA VTGAVLIGQW PEAAMVMVLF TVAELIEARS LDRARNAIGG
LMQLTPDMAT VQQADGQWRE LDVREVAIGA LVRVRPGERI GLDGEVTRGQ SSVDQAPITG
ESLPVEKGVG DKLFAGTINQ AGALEFRVTA AAGQSTLARI IKAVEEAQGA RAPTQRFVDR
FSRIYTPVVF AIALAVALIP PLFLAGAWFD WVYRALVLLV VACPCALVIS TPVTIVSGLA
AAARKGILIK GGVYLEGGRH LDFLALDKTG TITHGKPVQT DAKVLAPLFE DRAQALAASL
GERSDHPVSR AIAEFGKQQG LALSEVSDFV ALAGRGVRGV IAGEVYHLGN HRLVEELGLC
SPALEAQLDA LERQGKTVVL LLDRSGPLAL FAVADTVKDS SRQAIAELHQ LGIKTVMLTG
DNPHTAQAIA AVVGIDRAEG NLLPADKLKT IEALYAQGHR VGMVGDGIND APALARAEIG
FAMAAAGTDT AIETADVALM DDDLRKIPAF VRLSRQSAAI LMQNIVLALG IKAIFLAITF
AGMATMWMAV FADMGVSLLV VFNGLRLLRK