| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5138 |
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| Symbol | |
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| ID | 1042547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5863010 |
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| End bp | 5863879 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148537 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747239 |
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| Protein GI | 26991814 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTT CCGAGCTGAA GGCCTTCTAC ATGGTGGCCC GTCTGGGCAG CATCACCCAG
GCGGCGAAGA AGCTTGGCCT CAGCCAGCCC ACGGTGACCA CGCAGATCCG CAGCCTGGAA
GGCCAGTACG CCGTGGAGCT GTTCTACCGC GGCGGGCGGC GCCTGGTGTT GAGCGAGGAG
GGCTTACGCC TGCTGCCGAT GGTCAAGGCG CTGCTGCAGC AGGAAGCCGA CATCGAGTTC
GAGCTGCGCA ACAGTGGCCA GGCCCAGGGC AGCCTGCGCA TTGCTGCCAC TGCGCCTTAC
TACATTCTCG ACCTGGTCAA GATCTATCGC GAACGCCTGC CGCAGGTTGA AGTGGCGGTG
GAGATCGGCA ACTCGCAGCA GGTGCTGGAA ATGCTCGAGG ATTACCGGGT GGACATTGCC
GCGTCGTCGC AATGGGTGGA GGACGCACGG TTGGTGCGGC GGATACTGGG CACTGACCCT
TTGGTGGTGG CGGTGCACCG CAACCATCCG CTGGCCCATC GCCAGACGGT GTCGATCGAG
GTGGTGTCGG GGCATTGCCT GCTGATGCGG GAGAAGGGCT CGACCACACG CAAGCTGACC
GAGCAGATGA TGCAGGAGGC TGGGGTCAAG GCCAGCGCCA TGATGGAAAT CGGCAGCCGC
GAGTCGATCC GCGAAGCGGT GCTGCGCAAT ATCGGCATCA GCGTGATTGC CCGCCATGAG
GTGCCGCACA ATCCCGAACT CCGGGTGCTG GCGCTGGAAA ATGCGCCGGT GATGCATGAG
TACCTGTATT GCCTGAAGGA GCGGCGCCAG GCCCGGTTGC CGGCGGCATT CCTGGGGGTG
GCGCAGGAAG TGGCCGGTTC GCAGTTCTAG
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| Protein sequence | MLSSELKAFY MVARLGSITQ AAKKLGLSQP TVTTQIRSLE GQYAVELFYR GGRRLVLSEE
GLRLLPMVKA LLQQEADIEF ELRNSGQAQG SLRIAATAPY YILDLVKIYR ERLPQVEVAV
EIGNSQQVLE MLEDYRVDIA ASSQWVEDAR LVRRILGTDP LVVAVHRNHP LAHRQTVSIE
VVSGHCLLMR EKGSTTRKLT EQMMQEAGVK ASAMMEIGSR ESIREAVLRN IGISVIARHE
VPHNPELRVL ALENAPVMHE YLYCLKERRQ ARLPAAFLGV AQEVAGSQF
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