| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5135 |
|---|
| Symbol | |
|---|
| ID | 1041647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5858951 |
|---|
| End bp | 5859976 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637148534 |
|---|
| Product | ABC transporter, periplasmic binding protein |
|---|
| Protein accession | NP_747236 |
|---|
| Protein GI | 26991811 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.659918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC ACCTTGCACT TGCCGTTGCC GTTTCCGCCG TGTTCAGCCT GCAGGCTTCG
GCCGCCGATA CCCAACTGAC GGTCTACACC GCCCTGGAAG CCGAGCAACT GAAAACCTAC
AAGCAGGCCT TCGAGAAAGC CAACCCGGAT ATCGAGATCA AGTGGGTGCG TGATTCCACC
GGTATCATCA CCGCCAAGCT GCTGGCGGAG AAAGAGCGCC CGCAAGCTGA CGCTGTGTGG
GGGCTGGCGG CATCGAGCCT GGCCATCCTC GACCAGAACG GCATGCTCGA AGCCTATGCG
CCAAAGGACC TGGGCAAGAT CTCCGGCAAT TATCGCGACG CCGCCAACCC GCCAGCCTGG
GTCGGCATGG ACGTGTGGGC CGCCACCATT TGCTTCAACA CCATCGAGGC CGAGAAACAG
GGTCTGAGCA AACCGGTGAG CTGGCAGGAC CTGACCAAGC CTGAGTACAA AGGCAAGATC
GTCATGCCCA ACCCGGCCTC GTCCGGCACC GGCTTCCTGG ATGTCAGTGC GTGGTTGCAG
ACCTTTGGCG AGCCGCAGGG CTGGGCCTAC ATGGATGCGC TGCACCAGAA CATTGGCCAG
TACGTTCATT CCGGCTCCAA ACCGTGCAAG CTGGCGGCGG CGGGCGAGTT CCCGATCGGT
ATTTCGTTCG AATACCCGGC CGTTCAGCTC AAGCGCCAAG GCGCGCCGTT GGACATCGTG
CTGCCAAAGG AGGGTTTGGG CTGGGAGATC GAGGCAACCG CAGTGATCAA AGGCTCGCCC
AAGGCCGATG TGGCCAAGCG CCTAGCCGAT TTCTCGGCCA GCCCGGCGGC CATGGAACTG
TACAAGGAAA ACTTCGCCGT ACTGGCCGCG CCGGGCATCG CCAAGCCGCA GACCGAGCTA
CCGGCGGATT ATGAGCAGCG GTTGATCAAG AACGACTTTG TCTGGGCTTC TAAAAACCGT
GACCAGATTC TGGCCGAATG GCGCAAGCGC TATGACGGCA AGTCGGAGAA GGTGGCCCAG
CAGTAA
|
|---|
| Protein sequence | MHKHLALAVA VSAVFSLQAS AADTQLTVYT ALEAEQLKTY KQAFEKANPD IEIKWVRDST
GIITAKLLAE KERPQADAVW GLAASSLAIL DQNGMLEAYA PKDLGKISGN YRDAANPPAW
VGMDVWAATI CFNTIEAEKQ GLSKPVSWQD LTKPEYKGKI VMPNPASSGT GFLDVSAWLQ
TFGEPQGWAY MDALHQNIGQ YVHSGSKPCK LAAAGEFPIG ISFEYPAVQL KRQGAPLDIV
LPKEGLGWEI EATAVIKGSP KADVAKRLAD FSASPAAMEL YKENFAVLAA PGIAKPQTEL
PADYEQRLIK NDFVWASKNR DQILAEWRKR YDGKSEKVAQ Q
|
|---|
| |