| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5122 |
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| Symbol | |
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| ID | 1041694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5843370 |
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| End bp | 5844968 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148521 |
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| Product | GMC family oxidoreductase |
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| Protein accession | NP_747223 |
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| Protein GI | 26991798 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCC CCGACCCGTT TCGCCAAGGC CTCGAACGCG GCTGGATCAC CCACGACGCC
TCGCGCCTGG AGCACGACCT GTTTCTGGAG GCCGACATTG CCGTGATCGG CAGTGGTGCC
GGCGGCGCCA CCAGTGCGCA GATGCTCAGC GCTGCCGGTT TCAAGGTACT GCTGATCGAA
GAAGGCCCAC TGAAGACCAG CAGCGATTTC CACCTGCTGG AGAGCGAAGC CTACGCCAGC
CTGTACCAGG AAGGGCTGGG GCGCATGAGC AAGGATGGCG CCATTACCAT CCTGCAGGGC
CGCGCCGTGG GCGGCACCAC GCTGGTGAAC TGGACCTCAA GCTTTCGTAC CCCGCCGCAA
ACCCTGGCGC ACTGGGCCTC GGTCCATGGC GTGAACGGTT TGGGCGAGGA TGAACTGCGC
CCCTGGTTCG AGCGCATGGA GCAGGAACTG GGCATCAGCC CTTGGGCCTT GCCGCCGAAT
GCCAACAACG ATGTGCTGCG CCGGGGCTGC GAACAGCTGG GTTACCGCTG GGGGGTGATC
CCGCGCAATG TGCGCGGCTG CTGGAACCTG GGCTACTGCG GCATGGGCTG CCCGGTGAAT
GCCAAACAAT CGATGCTGGT GACCCGTATA CCTGCCACCC TCGAGCAAGG CGGCGAACTG
CTGTATCTGG CGCGGGCCGA GCGCTTCGCT CACAACGGCG AACGCATTCA GAGCCTGACA
TGCCAGGCCC TGGACGCCCA GGGCATACAC CCTACCGGCA GGCAGGTCAG CGTGCAGGCA
CGCCATTACC TCCTGGCCGG TGGCGGTATC AACAGCCCGG CCCTGCTGCT GCGCTCTGCC
GCGCCCGACC CGCATGGTCG CCTGGGCAAG CGAACCTTCC TGCACCTGGT CAACTTCAGT
GCGGCACGCT TCAGCGAGCG TATCGACCCT TACTATGGCG CCCCGCAGTC GATTTACAGC
GATCACTTTC AGTGGCAAGA CGGCGCAGAC GGTCCGGTTG GCTACAAGCT GGAAGTGCCG
CCACTGCACC CGGCCCTGGC CAGCACCCTG CTGGGCGGGC AAGGCCACGA GAATGCCCAG
CGCATGGCCG AGCTGCCCCA TACCCATGTG ATGCTGGCGC TGCTACGCGA TGGTTTTCAC
CCCGAAAGCC AGGGCGGGTC CGTGGAGCTG CGCGGCGATG GTTCACCTGT GCTCGATTAC
CCGGTCACCG ACTACCTGCG GGACGGCTTG CGGCGCGCCT ACCGCAGCAT GGCACACGTC
CAGTTTGCCG CTGGCGCCAC CCATGTAACC CCGGTGCATA GCGACGCCAG CGCCGCCTCT
AGCCTGGAAC AGGCCCTGAC CATGATCGAC AAACTGCGCC TGGAGCCCTT CCGCACGCGC
TTGGGCAGCG CCCATGTGAT GGGCGGCTGC GCCCTCGGCG AAGACCCGCG CCACGCGGTG
TGCGACAGCC TGGGCCGCCA TCACCAGCTG GAAAACCTGT CGATTCACGA CGGTTCACTG
TTCCCCACCA GCATCGGCGC CAACCCGCAA TTGTCGGTGT ATGCCATCAG CGCCAGGCTC
AGCGAAGCAC TGGTCAGCCG CCTGGCACAC AGCGCATGA
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| Protein sequence | MPVPDPFRQG LERGWITHDA SRLEHDLFLE ADIAVIGSGA GGATSAQMLS AAGFKVLLIE
EGPLKTSSDF HLLESEAYAS LYQEGLGRMS KDGAITILQG RAVGGTTLVN WTSSFRTPPQ
TLAHWASVHG VNGLGEDELR PWFERMEQEL GISPWALPPN ANNDVLRRGC EQLGYRWGVI
PRNVRGCWNL GYCGMGCPVN AKQSMLVTRI PATLEQGGEL LYLARAERFA HNGERIQSLT
CQALDAQGIH PTGRQVSVQA RHYLLAGGGI NSPALLLRSA APDPHGRLGK RTFLHLVNFS
AARFSERIDP YYGAPQSIYS DHFQWQDGAD GPVGYKLEVP PLHPALASTL LGGQGHENAQ
RMAELPHTHV MLALLRDGFH PESQGGSVEL RGDGSPVLDY PVTDYLRDGL RRAYRSMAHV
QFAAGATHVT PVHSDASAAS SLEQALTMID KLRLEPFRTR LGSAHVMGGC ALGEDPRHAV
CDSLGRHHQL ENLSIHDGSL FPTSIGANPQ LSVYAISARL SEALVSRLAH SA
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