Gene PP_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5105 
Symbol 
ID1042679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5826340 
End bp5826618 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content63% 
IMG OID637148504 
Productsulfur carrier protein ThiS 
Protein accessionNP_747206 
Protein GI26991781 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.205609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA CCGCCCTTGG GTTGCAGGGC GGTTCGGCGC TAGAATGCTG GCCCCAAAGA 
ACAATGGTGG CCGTGCGCAT GCGCATTAAA TTGAACGGTG AACCTTACGA ACTGCCTGCC
GGCGAAAGCG TTGCAGCCCT GCTGGCGCGC CTGGAGCTGA CCGGGCGCCG TGTTGCAGTG
GAACTGAACC TGGATATCGT GCCGCGTAGC CAGCACGACA GCACGCTGCT GAATGACGGC
GACCAGGTCG AAGTGGTCCA CGCCATCGGT GGCGGCTGA
 
Protein sequence
MARTALGLQG GSALECWPQR TMVAVRMRIK LNGEPYELPA GESVAALLAR LELTGRRVAV 
ELNLDIVPRS QHDSTLLNDG DQVEVVHAIG GG