Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5105 |
Symbol | |
ID | 1042679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5826340 |
End bp | 5826618 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148504 |
Product | sulfur carrier protein ThiS |
Protein accession | NP_747206 |
Protein GI | 26991781 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.205609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA CCGCCCTTGG GTTGCAGGGC GGTTCGGCGC TAGAATGCTG GCCCCAAAGA ACAATGGTGG CCGTGCGCAT GCGCATTAAA TTGAACGGTG AACCTTACGA ACTGCCTGCC GGCGAAAGCG TTGCAGCCCT GCTGGCGCGC CTGGAGCTGA CCGGGCGCCG TGTTGCAGTG GAACTGAACC TGGATATCGT GCCGCGTAGC CAGCACGACA GCACGCTGCT GAATGACGGC GACCAGGTCG AAGTGGTCCA CGCCATCGGT GGCGGCTGA
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Protein sequence | MARTALGLQG GSALECWPQR TMVAVRMRIK LNGEPYELPA GESVAALLAR LELTGRRVAV ELNLDIVPRS QHDSTLLNDG DQVEVVHAIG GG
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