| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5094 |
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| Symbol | |
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| ID | 1044694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5817998 |
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| End bp | 5818684 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148493 |
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| Product | alanine racemase domain protein |
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| Protein accession | NP_747195 |
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| Protein GI | 26991770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.699197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TAGCAGACAA CCTTTCCGCG ATTTCCGCCC GTATCGCCAG TGCTGCCCAG
GCAGTCGGGC GTGATCCGGC CAGCGTCCAG TTGCTGGCCG TGAGCAAGAC CAAGCCCGCC
AGCGCTATCC GCGAGATCCA TGCCGCCGGT GTGCACGACT TCGGGGAGAA TTACCTACAG
GAAGCACTGA CAAAGCAGCA GGCCCTCAGC GACTTGCCCT TGATCTGGCA CTTCATCGGC
CCCATTCAGT CGAACAAGAC CAAAGCCATC GCCGAGCATT TCGACTGGGT GCATTCCGTG
GACCGCCTGA AAATTGCCCA ACGCCTGTCG GAACAGCGCC CTGCGGGGCT GGCGCCGCTG
AACATCTGCC TGCAGGTGAA CGTCAGCGGC GAAGACAGTA AATCCGGCTG CACCCCAGCC
GACCTACCCG CGTTGGCCAA AGCCGTAGCC GCACTGCCCA ACCTGCGCCT GCGCGGGCTG
ATGGCAATCC CGGAACCCAC CGAAGACCGC GCCACCCAGG AGGCCGCCTT CGCCAGCCTG
CGCAAGTTGC AGGAAGGCCT GGGGCTTGGC TTGGACACCC TGTCGATGGG CATGAGCCAC
GACCTGGAAG CGGCCATCGC CCAGGGCGCG ACGTGGGTAC GGATTGGCAC GGCCCTGTTC
GGAGCCCGCG ACTACGGCAA CACCTGA
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| Protein sequence | MSTLADNLSA ISARIASAAQ AVGRDPASVQ LLAVSKTKPA SAIREIHAAG VHDFGENYLQ
EALTKQQALS DLPLIWHFIG PIQSNKTKAI AEHFDWVHSV DRLKIAQRLS EQRPAGLAPL
NICLQVNVSG EDSKSGCTPA DLPALAKAVA ALPNLRLRGL MAIPEPTEDR ATQEAAFASL
RKLQEGLGLG LDTLSMGMSH DLEAAIAQGA TWVRIGTALF GARDYGNT
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