| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5074 |
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| Symbol | hemE |
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| ID | 1041992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5790644 |
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| End bp | 5791708 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148473 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | NP_747175 |
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| Protein GI | 26991750 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC TGAAGAACGA TCGTTTCCTG CGTGCACTGC TCAAGCAACC CGTAGACGTC
ACCCCGGTGT GGATGATGCG CCAGGCCGGC CGCTACCTGC CGGAGTACCG CGCCAGCCGC
GCCAAGGCCG GTGACTTCAT GAGCCTGTGC ATGAACCCGC AGTTCGCCTG CGAGGTCACC
CTGCAGCCGC TGGACCGCTA CCCGCTGGAT GCAGCGATCC TGTTCTCGGA CATCCTTACC
ATTCCCGATG CCATGGGCCT GGGCCTGTAC TTTGAAACCG GCGAAGGCCC GCGTTTCAAG
AAGGTCATCA GCACCCCCGC CGACATCGAG GCGCTGCCAG TTCCGGACCC ACAGAAAGAC
CTCGGCTACG TGATGGATGC GGTCAGCACC ATTCGCCGTG AGCTCAATGG CCGTGTGCCG
TTGATCGGCT TCTCCGGCAG CCCGTGGACC CTGGCTACCT ACATGGTCGA AGGCGGCTCG
TCGAAGGACT TCCGCAAGAC CAAGGCCATG GCCTACGACA ACCCGCAAGC CCTGCACCTG
CTGCTGGACA AGCTGGCCCA GTCGGTCACC AGCTACCTTA ACGGCCAGAT CCTGGCCGGC
GCCCAGGCCG TACAGATCTT CGACACCTGG GGCGGCAACC TGTCGGCGGC GGCCTATCAG
GAGTTCTCCC TGGCCTACAT GCGCAAGATC GTCAGCGGCC TGATCCGCGA GCACGAGGGG
CGCAAGGTGC CGGTGATCCT GTTCACCAAG AATGGTGGCT TGTGGCTGGA AAGCATTGCC
GAAGCCGGCG CCGACGCGCT GGGCCTGGAC TGGACCTGCG AGATCGGCGA CGCCCGTCGC
CGCGTGGGTG ACAAGGTGGC GCTGCAAGGC AACATGGACC CGACCGTGCT GTATGCCAAG
CCCGAGGCCA TTCGCAAGGA AGTGGCGCGC ATCCTGGCCA GCTATGGCCA CGGCACTGGC
CATGTGTTCA ACCTTGGCCA CGGCATCACG CCGGAAGTTG ACCCGGAACA TGCGGGTGCA
TTCATCAACG CCGTGCACGA ACTGTCGGCG CAGTACCACC AGTGA
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| Protein sequence | MTALKNDRFL RALLKQPVDV TPVWMMRQAG RYLPEYRASR AKAGDFMSLC MNPQFACEVT
LQPLDRYPLD AAILFSDILT IPDAMGLGLY FETGEGPRFK KVISTPADIE ALPVPDPQKD
LGYVMDAVST IRRELNGRVP LIGFSGSPWT LATYMVEGGS SKDFRKTKAM AYDNPQALHL
LLDKLAQSVT SYLNGQILAG AQAVQIFDTW GGNLSAAAYQ EFSLAYMRKI VSGLIREHEG
RKVPVILFTK NGGLWLESIA EAGADALGLD WTCEIGDARR RVGDKVALQG NMDPTVLYAK
PEAIRKEVAR ILASYGHGTG HVFNLGHGIT PEVDPEHAGA FINAVHELSA QYHQ
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