| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5048 |
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| Symbol | ntrC |
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| ID | 1043594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5754878 |
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| End bp | 5756314 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148447 |
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| Product | nitrogen metabolism transcriptional regulator NtrC |
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| Protein accession | NP_747149 |
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| Protein GI | 26991724 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAA GTGAAACCGT ATGGATCGTC GACGATGATC GCTCCATCCG CTGGGTCCTG
GAAAAAGCCC TGCAACAGGA AGGCATGACC ACCCAGAGCT TCGACAGCGC AGACGGTGTC
ATGGGGCGCC TGGCACGTCA GCAACCCGAC GTGATCATTT CCGACATTCG CATGCCTGGC
ACCAGCGGCC TCGACCTGCT GGCGCAGATC CGCGAGCAGC ACCCGCGCCT GCCGGTCATC
ATCATGACCG CCCACTCCGA CCTGGACAGC GCCGTGGCCT CGTACCAAGG CGGTGCCTTC
GAGTACCTGC CCAAGCCATT CGACGTCGAC GAAGCGGTAT CGCTGGTCAA GCGCGCCAAC
CAGCACGCCC AGGAGCAGCA AGGCCTGGAT GTGCCACAGA ACCTGGCGCG CACCCCGGAA
ATCATTGGTG AAGCCCCGGC AATGCAGGAG GTGTTCCGCG CCATCGGCCG CCTCAGCCAC
TCCAACATCA CCGTGCTGAT CAACGGCGAG TCCGGCACCG GCAAAGAACT GGTGGCCCAC
GCCCTGCACC GGCACAGCCC ACGCGCAGCA TCCCCGTTCA TTGCCCTGAA CATGGCCGCC
ATCCCCAAGG ACTTGATGGA GTCGGAGCTG TTCGGCCATG AGAAAGGCGC CTTCACAGGT
GCTGCCAACT TGCGTCGCGG CCGTTTCGAG CAGGCCGATG GTGGCACGCT GTTTCTCGAC
GAAATCGGGG ACATGCCTGC CGACACCCAG ACCCGCCTGC TGCGTGTGCT GGCCGATGGC
GAGTTCTACC GCGTGGGCGG CCATGTGCCG GTCAAGGTCG ACGTGCGCAT CATCGCCGCC
ACCCACCAGA ACCTGGAGTC ACTGGTGCAG GCCGGCAAGT TCCGTGAGGA CTTGTTCCAC
CGCCTGAACG TGATCCGTAT CCATATTCCG CGCCTGGCCG ACCGCCGCGA GGATATCCCC
GCCCTCGCCC GCCACTTCCT TGCCCGGGCG GCCCAGGAGC TGGCAGTCGA GCCGAAGATC
CTCAAGCCGG AGACTGAAGA GTTCATCCGC AACCTGCCAT GGCCGGGCAA TGTGCGACAG
ATGGAGAACA CCTGCCGCTG GATCACCGTG ATGGCCTCCA GCCGCGAAGT GCTGATCGGC
GACCTGCCAC CAGAACTGCT GAACCTGCCA CACGATGCCG CGCCGGTAAC CAACTGGGAG
CAGGCCCTGC GCCAGTGGGC CGACCAGGCC TTGGCGCGCG GGCAGACCAG CCTGCTGGAC
AGCGCAGTGC CGAGCTTTGA ACGGATCATG ATCGAGACGG CACTCAAGCA CACCGCCGGC
CGCCGTCGCG ATGCTGCGCT GTTGCTGGGT TGGGGGCGCA ATACCCTGAC GCGCAAGATC
AAGGAGCTGG GGATGAATGT GGCCGGGGGG GATGATGAGG AAGGTGATGA CCACTGA
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| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV MGRLARQQPD VIISDIRMPG
TSGLDLLAQI REQHPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAN
QHAQEQQGLD VPQNLARTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRAA SPFIALNMAA IPKDLMESEL FGHEKGAFTG AANLRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHVP VKVDVRIIAA THQNLESLVQ AGKFREDLFH
RLNVIRIHIP RLADRREDIP ALARHFLARA AQELAVEPKI LKPETEEFIR NLPWPGNVRQ
MENTCRWITV MASSREVLIG DLPPELLNLP HDAAPVTNWE QALRQWADQA LARGQTSLLD
SAVPSFERIM IETALKHTAG RRRDAALLLG WGRNTLTRKI KELGMNVAGG DDEEGDDH
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