Gene PP_5002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5002 
Symbol 
ID1043912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5698868 
End bp5699245 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID637148402 
Producthypothetical protein 
Protein accessionNP_747104 
Protein GI26991679 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TGCCTACCGC CATCAACCTG CACAAAGCCT CCAAGACCCT CAGCCTCACC 
TACGCACCCG GCGAGGTCTA CCACCTGCCC GCCGAATTCC TGCGCGTGCA CTCTCCCTCC
GCCGAGGTCC AGGGCCACGG CAACCCCATC CTGCAGTTCG GCAAGATCAA CGTCGGCCTC
AGTGGCTTGG AACCTGCCGG CCAATATGCA CTGAAACTGA CCTTCGACGA CGGCCATGAC
AGCGGCTTGT TCACTTGGGA ATACCTTGAG CAACTGTGCC TGCGCCAGGA ACAACTGTGG
GCAGAATACC TCGATGAGTT GCAAAAGGCC GGCAAATCCC GCGACCCAGC CGAATCTGTG
GTCAAGCTCA TGCTCTAG
 
Protein sequence
MARLPTAINL HKASKTLSLT YAPGEVYHLP AEFLRVHSPS AEVQGHGNPI LQFGKINVGL 
SGLEPAGQYA LKLTFDDGHD SGLFTWEYLE QLCLRQEQLW AEYLDELQKA GKSRDPAESV
VKLML