Gene PP_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4970 
Symbol 
ID1044109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5662671 
End bp5663138 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID637148371 
Productcytochrome c', putative 
Protein accessionNP_747073 
Protein GI26991648 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.151016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGA TGTTTAAGCG ATTGACCGTT GTTCTGCTGG CAGCACTTGC CCTGGGAGGG 
GCTCTGACGG GTTGTGACCG GGTTGACCCG AATTCGCCGC TGGGCAAACG CAAGGTGATC
TTCAAGGACA TGCTCAAGAC CAGCGAGGAC CTCGGCGGCA TGCTGCGTGG CCGGTTGCCG
TTCGACGGGG TGAAGTTTGC CGACGGTGCG CTGAAGCTGG ACAGCCTGTC GCATCAGCCG
TGGCAGCATT TTCCACAGGT GCGCGATGGT GGTGACAGCG CCGCCCGTGC CGAAGTGTGG
GAGCGCCAGG CGCGGTTCCA TGACCTGGCC CGGCAGCTTG AGGGCGTCAC CGGCGAACTG
GTCGATGTCA CCCGCAACCA GCCACTGGAT GCTGCGAAAC TGAAGGCACC GATGGACAAG
GTCGAGGCTG CGTGCAAGGC CTGTCATAGC GAATTTCGTA ATCATTGA
 
Protein sequence
MSVMFKRLTV VLLAALALGG ALTGCDRVDP NSPLGKRKVI FKDMLKTSED LGGMLRGRLP 
FDGVKFADGA LKLDSLSHQP WQHFPQVRDG GDSAARAEVW ERQARFHDLA RQLEGVTGEL
VDVTRNQPLD AAKLKAPMDK VEAACKACHS EFRNH