| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4954 |
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| Symbol | |
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| ID | 1042425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5644643 |
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| End bp | 5646826 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148355 |
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| Product | integral membrane protein, YccS/YhfK family |
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| Protein accession | NP_747057 |
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| Protein GI | 26991632 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGA GCTCGTTCCG TCAGTCACTG CGTCGCCTGT GGGGCCAAGA CAAGTTCAGC
TACAGCATCC GGGTCACCAT TGCCCTCACC GGCAGCCTGG CCCTGTGCTG GTACCAGAAC
GAGATGGCCC TGCTGATTCC GCTGTTCCTC GGCATCATCG CCAGCGCCCT GGCCGAAACC
GACGACAGCT GGCAGGGCCG CCTCAGCGCC CTGGCCGTTA CCCTGGTGTG CTTCGCCATC
GCTGCACTGG CAGTCGAGTT GCTATTCCCC TACCCCTGGA TCTTCGTCGT TGCCCTGGCC
CTGGCTGCCT TTGGCCTGAC CATGCTCGGG GCGCTGGGCG AGCGCTACGG CGCCATCGCT
TCGGCCACCT TGATCACTGC GGTCTACACC ATGATCGGCG TGGACCAGCG CGGCGGCCAG
GTCACCGACT TCTGGCACGA ACCGCTGCTG CTGGTGGCAG GTGCGGCCTG GTACGGGCTG
TTGTCGGTGC TGTGGCAGGC GCTGTTTTCC AACCAGCCGG TACAGCAGAG CCTGGCCAGA
CTGTTCTTCG AGCTGGGCAG CTACCTGAAG CTCAAGGCCA GCCTGTTTGA ACCGGTCCGC
ACGCTCGACG TCGAGGCACG GCGCCTGGAA CTGGCCCAGC AGAACGGCAA GGTGGTGGCC
GCGCTGAACG CAGCCAAGGA GATCATCCTG CACCGGGTGG GCAACAGCCA ACCAAACTCG
AAGGTAAGCC GCTACCTCAA GCTGTACTTC CTGGCCCAGG ATATCCACGA GCGTGTCAGT
GCCTCGCACT ACCCCTACAA CGCACTGACC GAGGCGTTTT TCCACAGCGA CGTCATGTTC
CGCTGCCAGC GCCTGTTGCG TAAGCAGGGT TCATCCTGCC AGGAACTGGC CCGCTCGATC
CGCCTGCGCC AACCGTTCGT GCTGGCCAGC GGTTATCCAG AAGCCCTCGA AGACCTCAAC
GCCTCGCTGG AGCACCTGCG CATCCAGAGC AACCCGGCCT GGCGCGGCCT GTTGCGCTCA
CTGCGGGCAC TCGCCGCCAA CCTGGCAACA CTGGACCGCC TGCTCAGTGC CGCCAGCAAC
CCGGACAGCC TGGCCGACGC CAGCGACAGC AGCCTGCTCG ACCGCTCGCC GCGCTCGCTG
AAGGACGTGT GGACGCGCCT GCGCACCCAG CTCACACCGA CCTCGCTGTT GTTCCGCCAT
GCCTTGCGCC TGCCGCTGGC GCTGTCGATC GGCTATGGCA TGGTGCACCT GATTCACCCG
ACCCAAGGCT ACTGGATCAT CCTCACCACG CTGTTCGTCT GCCAGCCCAA CTATGGGGCC
ACGCGGCGCA AGCTGGTGCA GCGAATCTTC GGCACTGCCG TTGGCCTGAC AGTGGGTTGG
GCCTTGTTCG ACCTGTTCCC CAACCCGGTC ATCCAGTCGT TGTTCGCCGT GGTTGCCGGG
GTGGTGTTCT TCGTCAACCG CACCACCCGA TACACCCTGG CCACTGCCGC GATCACCCTG
ATGGTGCTGT TCTGCTTCAA CCAGATCGGC GATGGCTACG GCCTGTTCCT GCCGCGCCTG
TTCGATACCC TGGTCGGCAG CCTGATTGCC ATTCTTGCAG TGTTCCTGTT CCTGCCTGAC
TGGCAGGGCC GACGGCTGAA CAAGGCGCTG GCCAATACCC TGGCCTGCGC CAGCGTGTAC
CTGCGCCAGA TCATGCAGCA GTATGCCCAC GGCAAGCGCG ACGACCTGGC CTACCGCCTG
GCCCGGCGCA ATGCCCACAA CGCTGACGCG GCGTTGTCCA CCACCTTGGC CAACATGCTG
ATGGAGCCGG GGCATTTCCG TAAGGAGGCC GACGTTGGCT TTCGCTTCCT GGTGCTGTCG
CACACCTTGC TCAGCTACCT CTCGGGGTTA GGCGCGCACC GCGACACGGC GTTGCCAGCC
GAGGTGCAGG AGCAGTTGAT CGAAGGCGCC GGGCAAAGCC TGGCCAGCAG CCTGGACGAA
ATTGCCAACG GCCTGGCCGC GCGGCTGCCG GTGGCGATTC ACAGTGATTC CGAAGAGGCG
TTGGCCAATG CCCTGGAGCA GATGCCGGAA GATCTGGATG AGCATCAGCG GTTGGTGCAG
ACGCAGCTGG CGTTGATATG CCGGCAGCTG GGGCCACTGC GGACCCTGGC GGCACACCTG
ATCAAGGAGA ATGCCCCGGC CTGA
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| Protein sequence | MSSSSFRQSL RRLWGQDKFS YSIRVTIALT GSLALCWYQN EMALLIPLFL GIIASALAET
DDSWQGRLSA LAVTLVCFAI AALAVELLFP YPWIFVVALA LAAFGLTMLG ALGERYGAIA
SATLITAVYT MIGVDQRGGQ VTDFWHEPLL LVAGAAWYGL LSVLWQALFS NQPVQQSLAR
LFFELGSYLK LKASLFEPVR TLDVEARRLE LAQQNGKVVA ALNAAKEIIL HRVGNSQPNS
KVSRYLKLYF LAQDIHERVS ASHYPYNALT EAFFHSDVMF RCQRLLRKQG SSCQELARSI
RLRQPFVLAS GYPEALEDLN ASLEHLRIQS NPAWRGLLRS LRALAANLAT LDRLLSAASN
PDSLADASDS SLLDRSPRSL KDVWTRLRTQ LTPTSLLFRH ALRLPLALSI GYGMVHLIHP
TQGYWIILTT LFVCQPNYGA TRRKLVQRIF GTAVGLTVGW ALFDLFPNPV IQSLFAVVAG
VVFFVNRTTR YTLATAAITL MVLFCFNQIG DGYGLFLPRL FDTLVGSLIA ILAVFLFLPD
WQGRRLNKAL ANTLACASVY LRQIMQQYAH GKRDDLAYRL ARRNAHNADA ALSTTLANML
MEPGHFRKEA DVGFRFLVLS HTLLSYLSGL GAHRDTALPA EVQEQLIEGA GQSLASSLDE
IANGLAARLP VAIHSDSEEA LANALEQMPE DLDEHQRLVQ TQLALICRQL GPLRTLAAHL
IKENAPA
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