| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4953 |
|---|
| Symbol | |
|---|
| ID | 1041665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5643333 |
|---|
| End bp | 5644514 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637148354 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747056 |
|---|
| Protein GI | 26991631 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.683781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACTCCA CCGACGTGAT CATCCTTGGC GCCGGCGCCG CCGGCCTGAT GTGCGCCCAG
CTCAGTGCCC GTAGCGGCCG CCGGGTGCTG CTGCTCGACC ACGCCAACAA GCCAGGCAAG
AAAATCCTCA TGTCCGGCGG CGGGCGTTGC AACTTCACCA ACCTGTACAC CGAGCCGGCC
AACTTCCTTT CGCACAACGC GCACTTCTGC AAGTCGGCCC TGGCCCGCTA CACCCAGTGG
GACTTCATCG AGCTGGTGTG CAAGCACGGC GTGGCGTACC ACGAGAAGAA GCTCGGCCAG
CTGTTCTGTG ACAACAAGGC CAGCGACATC CTCGACATGC TGCTGGCCGA GTGCGACGAG
GCCGGTGCCG AGATCCGCAT GCACACCAGC ATCGAACAGA TCGAGAAGAC CGAAAGCGGC
TACCTGCTGC AGACCAGCGG CGGCCAGTTC GCCTGCCAGT CGCTGGTCAT CGCCACCGGC
GGCCTGTCGA TCCCGACCCT GGGCGCCACC GGTTTCGGCT ACCAGGTGGC CCGCCAGTTC
GGCCACACCC TGCTGCCAAC CCGCGCTGGG CTGGTGCCAT TCACCATCAC CGAGCCCCAA
CTCAAGGCGA TGTGCACCGA GTTGTCCGGC ACCTCGCTGG ACTGCACCGC CAGCTGCAAT
GGCACCAGCT TCCGCGAAAA CCTGCTGTTC ACGCACCGCG GCCTGAGCGG CCCGGCAATC
TTGCAGATCT CGTCGTTCTG GGAAGCCGGT GACACGGTCG AGATCAACCT GTTGCCCGAC
CGCGATGCGC TTTCCTGGCT GCAACAGATG CAGGCCGAAC GCGCCAACGC CGAACTGAAG
ACCGTGCTGG GCGAGGTGTT CACCCGCAAG CTGGCCAACT TGCTGGCCGA GCAGTGGTTC
GAGTCGAAGC CAATGAAGCA GTACACCCCG GCGGAACTGG CGCAAATCGC CGAAAAGCTG
GCGAACTGGC AGGTAGTACC GGCCGGCACC GAAGGCTACC GCACCGCCGA AGTGACCCTG
GGCGGCGTGG ATACCCGCGA GGTGTCGTCC AAGACCATGG AATCGCTGAA AAGCCCGGGG
TTGTACTTCA TCGGTGAAGT GCTGGATGTC ACCGGCCACC TGGGCGGCTT CAACTTCCAG
TGGGCTTGGG CATCGGCGAA CGCCGCCGCG CAGTTCGTGT AG
|
|---|
| Protein sequence | MHSTDVIILG AGAAGLMCAQ LSARSGRRVL LLDHANKPGK KILMSGGGRC NFTNLYTEPA
NFLSHNAHFC KSALARYTQW DFIELVCKHG VAYHEKKLGQ LFCDNKASDI LDMLLAECDE
AGAEIRMHTS IEQIEKTESG YLLQTSGGQF ACQSLVIATG GLSIPTLGAT GFGYQVARQF
GHTLLPTRAG LVPFTITEPQ LKAMCTELSG TSLDCTASCN GTSFRENLLF THRGLSGPAI
LQISSFWEAG DTVEINLLPD RDALSWLQQM QAERANAELK TVLGEVFTRK LANLLAEQWF
ESKPMKQYTP AELAQIAEKL ANWQVVPAGT EGYRTAEVTL GGVDTREVSS KTMESLKSPG
LYFIGEVLDV TGHLGGFNFQ WAWASANAAA QFV
|
|---|
| |