| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4890 |
|---|
| Symbol | hisZ |
|---|
| ID | 1042009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5559305 |
|---|
| End bp | 5560492 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148291 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | NP_746993 |
|---|
| Protein GI | 26991568 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.625991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG TAGACCGCTG GCTGCTGCCA GATGGCATCG AGGAAGTACT GCCACCTGAG
GCTGCGCGCA TCGAGATCGC GCGCCGCCAG GTGTTGGACC TGTTCCAGAG TTGGGGCTAC
GAACTGGTCG TCACCCCGCA TATCGAGTAC CTGGAGTCGC TGCTTACCGG CGCCGGCCAG
GACCTGGATC AGCGCACCTT CAAGGTAGTG GACCCGCAGT CCGGCCGCCT GATGGGCTTC
CGCGCCGACT TCACCCCGCA GGTAGCGCGT ATCGATGCGC ACACACTGCG CCGTGAAGGC
CCGAGCCGGC TGTGCTATGC CGGCAGCGTG CTGCACGCTC AGCCACGTGC CTTGTCCACC
TCGCGCAGCC CGATCCAGCT GGGTGCCGAA CTGTACGGCG ATGCCAGCCC TACCAGCGAT
GTCGAAGTCA TCAGCCTGAT GCTCGCCACG CTGCAACTGG CCGATGTGCC GGATGTTCAC
ATGGACCTGG GCCATGTCGG CATCTACCGC GGCCTGGCCC GTGCCGCCGG TCTGTCCGGC
GCGGTCGAAC AGCAGCTGTT CGACGCCATG CAACGCAAGG CTGTCGATGA AGTGCAGGCG
CTGACGGCCG ACCTGCCGAA AGACCTGGGC AGCATGCTGC GCGCCCTGGT CGAGCTGTGT
GGTGGTCGGG AAGTACTGGC TGAAGCCCGC GTGCGCCTCG GTCGCGCCCC GGCCAGCGTG
CTGGCGGCGC TGGATGACCT GCTGGCGATC GCTGATCGCC TGGCGTCGCG CTACCCGGAC
CTGCCGCTGT ACTTCGACCT CGGCGAGCTG CGTGGTTACC ACTACCACAC GGGCGTGGTG
TTCGCCGTGT TCGTGCCAGG CGAAGGCCAA TCGATCGCCC AGGGCGGTCG CTACGACGAT
ATCGGCGCCG ACTTTGGCCG GGCGCGCCCG GCCACTGGTT TCTCCACGGA TTTGAAGACC
CTGGTCACAC TGGGGCGAGC GGAGGTCGTA TTGCCAACTG GCGGCATCTG GATGCCGGAC
AGTGGCGATG CGGCCCTCTG GCAGCAAGTC TGCCAGTTGC GCAACGAGGG CCAGCGTGTG
GTTCAGGCTC TGCCTGGCCA GCCGTTGAGT GCTGCTCTCG AGGCGGATTG TGATCGGCAA
TTGATTCAGC AAGACGGGCG CTGGCAGGTT CTGCCGCTGG CCCAGTGA
|
|---|
| Protein sequence | MATVDRWLLP DGIEEVLPPE AARIEIARRQ VLDLFQSWGY ELVVTPHIEY LESLLTGAGQ
DLDQRTFKVV DPQSGRLMGF RADFTPQVAR IDAHTLRREG PSRLCYAGSV LHAQPRALST
SRSPIQLGAE LYGDASPTSD VEVISLMLAT LQLADVPDVH MDLGHVGIYR GLARAAGLSG
AVEQQLFDAM QRKAVDEVQA LTADLPKDLG SMLRALVELC GGREVLAEAR VRLGRAPASV
LAALDDLLAI ADRLASRYPD LPLYFDLGEL RGYHYHTGVV FAVFVPGEGQ SIAQGGRYDD
IGADFGRARP ATGFSTDLKT LVTLGRAEVV LPTGGIWMPD SGDAALWQQV CQLRNEGQRV
VQALPGQPLS AALEADCDRQ LIQQDGRWQV LPLAQ
|
|---|
| |