| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4867 |
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| Symbol | |
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| ID | 1043170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5533335 |
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| End bp | 5534471 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637148268 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | NP_746972 |
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| Protein GI | 26991547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0924005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00865323 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGA CGTTTTACAA GAAAGGTTTC CTGGCTCTGG CCGTAGCTAC GGCACTGGGT
GTTTCTTCGT ATGTTCAGGC CGACGTCAAG ATCGGTGTAG CGGGCCCCAT GACTGGGGCA
AACGCAGCGT TTGGCGAGCA GTACATGAAA GGTGCGCAGG CAGCGGCTGA CAAGATCAAC
GCCGCTGGTG GCGTGAATGG CGAGAAAATC GTCCTGGTCA AAGGCGATGA CGCCTGTGAA
CCGAAGCAAG CCGTGGCCGT GGCCAACCGC CTGGTCGATC AGGACAAGGT GATTGGCGTG
GTGGGCCACT TCTGTTCCTC CAACACGATC CCGGCGTCCG AGGTATATGA CGAGGCGGGC
GTGATCGCCA TCACCCCAGG CTCCACCAAC CCACAGGTCA CTGAGCGCGG CCTGAGTGCC
ATGTTCCGCA TGTGCGGCCG TGACGACCAG CAGGGTATCG TCGCTGGCGA CTACATCGTC
GACGTGCTCA AGGGCAAGAA GGTTGCGGTG TTGCACGACA AGGACACCTA CGGCCAGGGC
CTGGCTGACG CGACCAAGGC GCAGCTGGAA AAACGCGGCG TGAAGCCTGT GCTGTACGAA
GGCCTGACCC GTGGCGAGAA AGACTTCAGC GCGGTGGTCA CCAAGATCCG CTCTACCGGT
GCCGACGTGG TCTACTTCGG CGGCCTGCAC CCGGAAGCCG GCCCGCTGGT ACGCCAGCTG
CGCGAGCAAG GCCTGAAGGA CGTCAAGTTC ATGTCCGATG ATGGCATCGT CACCGACGAA
CTGGTGTCTA CCGCCGGCGG CGCGCAATAC GTTGACGGCG TGTACATGAC CTTCGGTGCC
GACCCGCGCC TGCTGCCAGA CAGCAAGGCG GTGGTGGAGG AGTTCCGCAA GGCCGGCACC
GAACCTGAGG GCTACACCCT GTACGCCTAC GCTTCGCTGC AGGCTCTGGC TGCCGCTTTC
AATGGCGCGA AGTCGAACAA GGGCGAGGAC GCTGCCAAGT GGCTCAAGGC CAACCCGGTG
CAGACCGTCA TGGGTGAGAA GAAGTGGGAC AGCAAGGGCG ACCTGACCGT CTCCGACTAC
GTGGTCTACC AGTGGGACAA GACCGGTAAA TACCACCAGC TGGAAAAACA AAAATAA
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| Protein sequence | MSQTFYKKGF LALAVATALG VSSYVQADVK IGVAGPMTGA NAAFGEQYMK GAQAAADKIN
AAGGVNGEKI VLVKGDDACE PKQAVAVANR LVDQDKVIGV VGHFCSSNTI PASEVYDEAG
VIAITPGSTN PQVTERGLSA MFRMCGRDDQ QGIVAGDYIV DVLKGKKVAV LHDKDTYGQG
LADATKAQLE KRGVKPVLYE GLTRGEKDFS AVVTKIRSTG ADVVYFGGLH PEAGPLVRQL
REQGLKDVKF MSDDGIVTDE LVSTAGGAQY VDGVYMTFGA DPRLLPDSKA VVEEFRKAGT
EPEGYTLYAY ASLQALAAAF NGAKSNKGED AAKWLKANPV QTVMGEKKWD SKGDLTVSDY
VVYQWDKTGK YHQLEKQK
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