| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4803 |
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| Symbol | dacA |
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| ID | 1042250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5465460 |
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| End bp | 5466620 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637148204 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | NP_746908 |
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| Protein GI | 26991483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.273378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CCAACCTTGC CAAACGACTT TGCCTGCCTG TACTGCTGCT GATCACGCCT
GCCGCCTTCG CGGCGGAGCA GATGACGCCG GCGCCACCGC AACTGGCAGC CAAGTCCTAC
GTACTCATGG ACGCGTCCAG CGGCAACGTG CTGGTCGAGA ACAACGGTGA CGAGCGCCTG
CCGCCAGCCA GCCTGACCAA GCTGATGACC GCCTATATCG CCACCCTGGA CATCCGCCGC
GGCCAGATCG GTGAAAGCGA CCCGGTTACC GTCAGCGAAA ACGCCTGGCG TACCGGCGGT
TCGCGCATGT TCATCAAGGT TGGTAGCCAG GTAACGGTCA GCGACCTGCT GCACGGCATC
ATCATCCAGT CCGGTAACGA CGCCTCGGTC GCCCTGGCCG AGCACATCGC CGGCAGCGAA
GACGCCTTTG CCGACATGAT GAACAAGACG GCTGCCGACC TGGGCATGAC CAACAGCCAC
TTCATGAACC CTACCGGTCT GCCGCACCCC GAGCATTACT CGTCGGCGCA CGACATGGCG
ACCCTGGCCC GTGCGATCAT CAACGTCGAC CCGGCCCACT ACGCCATCTA CTCGCAGAAA
GAGTTCTTCT GGAACAACAT CAAGCAGCCT AACCGCAACC TGCTGCTGTG GCGTGACAAG
ACCGTCGATG GCCTGAAAAC CGGTCACACC GACGAAGCCG GCTACTGCAT GGTGGCTTCG
GCCGTTCGTG ACGGCCAGCG CCTGATCGCC GTGGTGTTCG GTACCAACAG CGAGCAATCG
CGTGCTGCCG AAACCCAGAA GCTGCTGACC TACGGTTTCC GCTTCTTCGA AACCCAGACC
TTCTACCAGA AAGGCACCGA GCTGACCCAG GCGCCGGTCT GGAAGGGCGC TACCAGCCAA
GTCAAGGCTG GCCTGGCTGA CGACCTGACC ATGACTATGC CTAAAGGCCA ATTGAAGCGC
CTGCAGGCTT CGATGACCAT GAACCCGCAG CTCACCGCAC CGATCGCCAA AGGTGACGTG
ATCGGCAAAG TGGAAGTCAA ACTGGACGAA AAAGTGATTC ACAGTGCCGA CCTGATCGCC
CTTGATGGCG TCGAGGAAGG TGGTTTCTTC CGCCGTATGT GGGATAGCAT CCGTCTATTC
TTCTACGGGT TGTTCAACTG A
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| Protein sequence | MNITNLAKRL CLPVLLLITP AAFAAEQMTP APPQLAAKSY VLMDASSGNV LVENNGDERL
PPASLTKLMT AYIATLDIRR GQIGESDPVT VSENAWRTGG SRMFIKVGSQ VTVSDLLHGI
IIQSGNDASV ALAEHIAGSE DAFADMMNKT AADLGMTNSH FMNPTGLPHP EHYSSAHDMA
TLARAIINVD PAHYAIYSQK EFFWNNIKQP NRNLLLWRDK TVDGLKTGHT DEAGYCMVAS
AVRDGQRLIA VVFGTNSEQS RAAETQKLLT YGFRFFETQT FYQKGTELTQ APVWKGATSQ
VKAGLADDLT MTMPKGQLKR LQASMTMNPQ LTAPIAKGDV IGKVEVKLDE KVIHSADLIA
LDGVEEGGFF RRMWDSIRLF FYGLFN
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