| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4796 |
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| Symbol | holA |
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| ID | 1041615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5459580 |
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| End bp | 5460617 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148197 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | NP_746901 |
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| Protein GI | 26991476 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.306681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG CCCCCGCCCA ACTCAACAAG CACCTGCAAG GCGCCCTGGC ACCGGTCTAC
GTGGTCAGTG GCGACGACCC GCTGCTGTGC CAGGAAGCCG CCGACGCCAT CCGCAATGCC
GCGCGTCAGC AAGGTTTCGA TGAACGCCAG GTATTCAGTG CCGACGCCAA CTTCGACTGG
GGCACCCTGC TCCAGGCCGG TGCAAGCCTG TCGCTGTTCG CCCAGCGCCG CCTGCTGGAA
CTGCGCCTGC CCTCGGGCAA GCCCGGTGAC AAGGGTGCCG CTGCGCTGAT GGAATACTGC
GCCAACCCCG CCGAAGACAC GCTGCTGCTG ATCAGCCTGC CCAAGCTCGA CAGCAGTGCG
CAGAAGACCA AGTGGGGCAA GGCATTGATC GAAGGCGCCC ATTGCCAGTT CATCCAGATC
TGGCCGGTGG ATGTGCACCA GCTCCCGCAG TGGATCAACC AGCGCCTGCA ACAGGCCGGC
CTGTCAGCCC AGCGTGATGC CGTCGACCTG ATTGCCGCGC GCGTGGAAGG CAACCTGCTG
GCAGCCGCGC AGGAAATCGA AAAACTCAAG CTGCTGGCCG AAGGCAGCCA GATCACCGTG
GAAACCGTGC AGGCTGCCGT CGCCGACAGT GCCCGCTTCG ATGTCTTCGG CCTGGTCGAT
GCCATTCTCA ACGGCGAGGC TGCGCATGCC CTGCGTATGC TCGAAGGCTT GCGCGGTGAA
GGTGTGGAGC CGCCAGTCAT CCTCTGGGCC TTGGCCCGTG AGCTGCGCCA ACTGGCGGGG
CTAGCCCAGC AGTTCAGCCA AGGCGTGCCA TTGGACAAAG CGTTCAGCCA GGCCCGCCCG
CCCATCTGGG ACAAACGCCG ACCGCTGGTC AGCAAGGCCC TGCAGCGCCT CTCGGCGCAG
CGTTGGGCGC AACTGCTGCA GGATGCCCAG CGAATCGATG CGCAGATCAA AGGGCAGGCT
GAAGGTTCGC CGTGGATTGG CCTGGCGCGG CTGTCGCTGT TGATGGCTGG CCAGCGCCTG
GCCCTCCCTC CCGAGTAA
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| Protein sequence | MKLAPAQLNK HLQGALAPVY VVSGDDPLLC QEAADAIRNA ARQQGFDERQ VFSADANFDW
GTLLQAGASL SLFAQRRLLE LRLPSGKPGD KGAAALMEYC ANPAEDTLLL ISLPKLDSSA
QKTKWGKALI EGAHCQFIQI WPVDVHQLPQ WINQRLQQAG LSAQRDAVDL IAARVEGNLL
AAAQEIEKLK LLAEGSQITV ETVQAAVADS ARFDVFGLVD AILNGEAAHA LRMLEGLRGE
GVEPPVILWA LARELRQLAG LAQQFSQGVP LDKAFSQARP PIWDKRRPLV SKALQRLSAQ
RWAQLLQDAQ RIDAQIKGQA EGSPWIGLAR LSLLMAGQRL ALPPE
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