| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4791 |
|---|
| Symbol | |
|---|
| ID | 1042861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5453340 |
|---|
| End bp | 5454668 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637148192 |
|---|
| Product | ISPpu9, transposase |
|---|
| Protein accession | NP_746896 |
|---|
| Protein GI | 26991471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.271992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA AGCCTTCCAA GCAACGCTTT ACCGTCGTCC ATCCCGATTG CGCGGCGATC
GATGTCGGTG GTCGAGAGCA TTTCGTGGCG GTCGATCCCC GGCACGAAAA TCCCGTCCAG
TCGTTCACGT CCTTTACTGA CGACCTGCTC AAGATGGCTA ACTGGCTTGA AAGCCTGGGG
ATCAAGGTCG TTGCCATGGA ATCCACGGGG GTTTATTGGA TTCCAATTTA CGAGATTCTC
AGCGAGCGCG GTTTTGACGT TTATCTCGTC AATGCCAGAG CAACTCGGCA AATCACGGGC
CGTAAATCAG ATGTGCTGGA TTGCCAGTGG ATCTGGCAGC TGATGACTCA TGGACTGCTC
AGAGGCGCAT TCCGCCCCGA TGATCTGACC TGCTGCGTCC GGTCATTGGT CAGGCAGCGT
GCTTCCAAAG TGAAAGACCA GGCGCAGACG CTGAACCGGA TGCAAAAGGC CATGAGCCAA
ATGAACATCC AGCTGGCCAA TGTCATCAGT GATATTTCCG GTGTAACTGG CATGAAGATT
TTGCGGGCCA TCTGCGCAGG TGAACGGGAC CCAGTGCAAC TGGCTGAACT AACCGACCGC
CGCATCAAGG CAGGCAAGGA GGCTGTCGCT CGGAGTCTTC ATGGCAATTG GCGGCGCGAG
CATTTGCATG CGCTAACTCA GGAATTGGCT GCCTATGACT TCCTGGAGCA GCAAATTGCA
GATTGTGACG ACGCCATAAA AGCCGCGTTA GAGCAGTTGC CGGTGCTGCA AAACAAGCCA
GAGCCATCCA AGAAGCCTTT ACGGAGCCCA CACCGAAACG GCGCCCAACA GACTGTATTG
CATCAGACTT TGTGGAAAGT TCTTGGCGTG GACCTAACCG CAATTCCAAC CATTGGGGTG
GACACTGCAT TAGTGCTGGC AGGGGAGATC GGTACAGATC TATCACGCTT CCCGTCCTCA
CAGCACTTCT GCTCTTGGTT GGGACTGGCT CCCCCTACCC GAATTTCCGG CGGTCATCGA
CTGGCAGGTG GTGGGCCCAA AATAGTCAAT CGAGCAGCGC AAGCACTCAA GCAGGCTGCA
TCCAATGCCC GTAACGACAA GGGTTTCATT GGCGCATCGC ACCGAGCCAG ACTGACTCGA
ATGGATACCA GCTGCGCCAT CAAGGCCACT GCGCATCAGT TGGCACGTCT GGTGTACAAC
CTGTTAACCA AGAAGCAGGC TTATGTTGAA CAAGGTCTTG AGGAGTTCGA AACCAGAAGC
CAAGACCGGC AGGTCCGGGC TTTGCTTCGC AAAGCCCGGA AACTGGGGTA TCAACTGGTG
GCCGCTTGA
|
|---|
| Protein sequence | MARKPSKQRF TVVHPDCAAI DVGGREHFVA VDPRHENPVQ SFTSFTDDLL KMANWLESLG
IKVVAMESTG VYWIPIYEIL SERGFDVYLV NARATRQITG RKSDVLDCQW IWQLMTHGLL
RGAFRPDDLT CCVRSLVRQR ASKVKDQAQT LNRMQKAMSQ MNIQLANVIS DISGVTGMKI
LRAICAGERD PVQLAELTDR RIKAGKEAVA RSLHGNWRRE HLHALTQELA AYDFLEQQIA
DCDDAIKAAL EQLPVLQNKP EPSKKPLRSP HRNGAQQTVL HQTLWKVLGV DLTAIPTIGV
DTALVLAGEI GTDLSRFPSS QHFCSWLGLA PPTRISGGHR LAGGGPKIVN RAAQALKQAA
SNARNDKGFI GASHRARLTR MDTSCAIKAT AHQLARLVYN LLTKKQAYVE QGLEEFETRS
QDRQVRALLR KARKLGYQLV AA
|
|---|
| |