| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4779 |
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| Symbol | |
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| ID | 1041881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5439360 |
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| End bp | 5440823 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148180 |
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| Product | AMP nucleosidase |
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| Protein accession | NP_746884 |
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| Protein GI | 161378119 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.549989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00166711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCCACG CTTTTGTAGT CGTTGATACC CCCGAACAGG CCGTCGACCG TCTGGCGGCC
TTGCATGAAC AGGCCACAGG TGCCCTTAGT CAGGCCCTGA AGCGTTACCT GAAGGACCGT
ACCGAGCCCG ATACCGATGA GCGCGACCTG TTCCGCTACC CGGCTCTGCG CCTGACCTAC
TACAGCCATG GCGAAGTCGC CGCCACCACC CGTGCCTATG CCAAGGTCCA GGTTGCCGGC
ACCTACAGCG TCACCGTCAC CCAGCCCGCT GCGTTCCGTG GCTACCTGCT TGAGCAACTG
CGCCCGCTGA TGCATGACTA CACCGTTACG GTAGAAGTCG GCGTCAGCGA GCAGAATATC
CCTTACCCCT ATGTGGTCGA CCAGGGCGAC GAGCTGGCCG GTAGCGGCAT TACCGCTGCG
CAGCTGGCGC GGGTGTTCCC CAGCACCGAC CTGTCGGCGG CCACCGACAA CATCGCTGAT
GGCCTGTACG ACTGGGACCG TGCTGAAATC ATGCCACTGG CGTTGTTCGA TGCCGCGCGC
GTCGACTTCT CGCTACGCCG CCTGGTGCAC TACACCGGCA GCGACTGGCG CCATGTACAG
CCGTGGATCC TGCTGACCAA CTACCACCGC TATGTCGACC AGTTCATCAG CCATGGCCTG
GACCAACTGC GTGACGACCC GCGCTTCGTA CGTATGGTGC TGCCGGGCAA CGTCGTGATC
GAAAAGGGCA TGGACCATGG CGAAACCCAG GCCCTGGTGG CCAGCGTGGT CTGGCACCGC
TACCAGATGC CGGCCTACCA CCTGATCGCC GCCGACGGCG ATGGCGTTAC CTTGGTCAAC
ATTGGTGTGG GCCCATCCAA CGCCAAGAAC ATCACCGACC ACCTGGCCGT GCTGCGCCCG
CATTGCTGGC TGATGATCGG TCACTGCGGC GGCCTGCGGC AGTCGCAGAC CATCGGCGAC
TACGTGCTGG CACACGCCTA TATGCGCCGT GACGGCATTC TCGACCGGGT CGTGCCGCCG
AATATCCCGA TCCCGGCCCT GGCCGAAGTA CAGATGGCCT TGCAGGAGGC CGCCGCTCAG
GTCACTGGCG AGCGTGGCGA GCAGTTGAAA AAGCGCCTGC GCACCGGCAC CGTGCTGACC
TACGACGACC GCAACTGGGA GCTGCGCTGG GCTCAGGAAC GCCCGCTGAT CAACCTGTCG
CGTGCCGTGG CGGTGGACAT GGAAAGCGGC ACCATTGCTG CCCAGGGCTA CCGTTTGCGC
GTACCTTACG GCACCTTGCT GTGTGTGTCC GACAAGCCGC TGCACAGCGA GATCAAACTG
CCAGGTTCGG CCAACGCCTT CTATAACCGG GCGGTCAGCC AGCACCTGAA GATCGGCATT
GCTGCCCTCG ATCTGCTGCG CACCGAGCTC AACTCGCTGC ACTCGCGTAA ACTGCGCAGC
TTCGATGAGC CGCCGTTCCG CTGA
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| Protein sequence | MSHAFVVVDT PEQAVDRLAA LHEQATGALS QALKRYLKDR TEPDTDERDL FRYPALRLTY
YSHGEVAATT RAYAKVQVAG TYSVTVTQPA AFRGYLLEQL RPLMHDYTVT VEVGVSEQNI
PYPYVVDQGD ELAGSGITAA QLARVFPSTD LSAATDNIAD GLYDWDRAEI MPLALFDAAR
VDFSLRRLVH YTGSDWRHVQ PWILLTNYHR YVDQFISHGL DQLRDDPRFV RMVLPGNVVI
EKGMDHGETQ ALVASVVWHR YQMPAYHLIA ADGDGVTLVN IGVGPSNAKN ITDHLAVLRP
HCWLMIGHCG GLRQSQTIGD YVLAHAYMRR DGILDRVVPP NIPIPALAEV QMALQEAAAQ
VTGERGEQLK KRLRTGTVLT YDDRNWELRW AQERPLINLS RAVAVDMESG TIAAQGYRLR
VPYGTLLCVS DKPLHSEIKL PGSANAFYNR AVSQHLKIGI AALDLLRTEL NSLHSRKLRS
FDEPPFR
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