Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4774 |
Symbol | |
ID | 1042045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5435820 |
End bp | 5436692 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148176 |
Product | cation diffusion facilitator family transporter |
Protein accession | NP_746880 |
Protein GI | 26991455 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00437993 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCACTA CCCCGGCTGA ACACCAGCGC CTGCTCCGCC TTGCCACGCG CGCATCACTG GCGGTGGCCG GCATCCTGGT GCTGAGCAAG GCGCTGGCCT GGTGGCTGAG CGGGTCGGTG AGCCTGCTGG CCGGGCTGAC CGACTCGGCA CTGGACGCCG TGGCCTCGTT CCTCAACCTG CTGGCGGTGC ACTACGCCCT GCGCCCGGCC GACGACGATC ACCGGTTCGG CCATGGCAAG GCCGAGGCCT TGGCCGGTAT GGCGCAGGCG CTGTTCATCG GTGGCAGTGC GGTGCTGATC GGGGTGCAGG CGGTCGAGCG TCTGTACACC CCGCAACCGC TGGGTGATAC CTCCATCGGT ATCGCGGTGA TGCTGCTGTC GCTGGTGCTG ACGGTCGCCC TGCTGGCGCT GCAGTACAAG GTCATCCGGC TCACCGGCTC CACTGCGGTA CGGGCAGATT CCCTGCACTA CCGTTCTGAC TTGTTGCTCA ACGGCAGCAT TCTGCTGGCC CTGTTGCTGA CGCGTTTTGG CTGGCCGCAG CTGGATGCGC TGTTCGGCCT GGGCATCGCC TTTTACATCC TCTGGAGTGC GTTGCAGATT GCCCGCGAAA GTACGGCGAT CCTGATGGAC AAGGCCTTAC CCGGCGATGT TGGCGAGGAC ATGACCGCGC TGGTGCTGGC CGTTGCAGGC GTGAAAGGCG TGCATGACCT GCGCACGCGC GTGTCGGGCA ACCAGTGGTT TGTGCAACTG CACCTGGAAC TGCCGGGGCA ACTGCCGCTG CATGAAGCGC ATAGCTTGTG CGTGGAGGCC TCGCGGGTGA TCCGCCAGCG TTACCCACAG GCAGACGTGA TGGTGCACGC CGACCCGGTA TGA
|
Protein sequence | MITTPAEHQR LLRLATRASL AVAGILVLSK ALAWWLSGSV SLLAGLTDSA LDAVASFLNL LAVHYALRPA DDDHRFGHGK AEALAGMAQA LFIGGSAVLI GVQAVERLYT PQPLGDTSIG IAVMLLSLVL TVALLALQYK VIRLTGSTAV RADSLHYRSD LLLNGSILLA LLLTRFGWPQ LDALFGLGIA FYILWSALQI ARESTAILMD KALPGDVGED MTALVLAVAG VKGVHDLRTR VSGNQWFVQL HLELPGQLPL HEAHSLCVEA SRVIRQRYPQ ADVMVHADPV
|
| |