Gene PP_4774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4774 
Symbol 
ID1042045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5435820 
End bp5436692 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID637148176 
Productcation diffusion facilitator family transporter 
Protein accessionNP_746880 
Protein GI26991455 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00437993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCACTA CCCCGGCTGA ACACCAGCGC CTGCTCCGCC TTGCCACGCG CGCATCACTG 
GCGGTGGCCG GCATCCTGGT GCTGAGCAAG GCGCTGGCCT GGTGGCTGAG CGGGTCGGTG
AGCCTGCTGG CCGGGCTGAC CGACTCGGCA CTGGACGCCG TGGCCTCGTT CCTCAACCTG
CTGGCGGTGC ACTACGCCCT GCGCCCGGCC GACGACGATC ACCGGTTCGG CCATGGCAAG
GCCGAGGCCT TGGCCGGTAT GGCGCAGGCG CTGTTCATCG GTGGCAGTGC GGTGCTGATC
GGGGTGCAGG CGGTCGAGCG TCTGTACACC CCGCAACCGC TGGGTGATAC CTCCATCGGT
ATCGCGGTGA TGCTGCTGTC GCTGGTGCTG ACGGTCGCCC TGCTGGCGCT GCAGTACAAG
GTCATCCGGC TCACCGGCTC CACTGCGGTA CGGGCAGATT CCCTGCACTA CCGTTCTGAC
TTGTTGCTCA ACGGCAGCAT TCTGCTGGCC CTGTTGCTGA CGCGTTTTGG CTGGCCGCAG
CTGGATGCGC TGTTCGGCCT GGGCATCGCC TTTTACATCC TCTGGAGTGC GTTGCAGATT
GCCCGCGAAA GTACGGCGAT CCTGATGGAC AAGGCCTTAC CCGGCGATGT TGGCGAGGAC
ATGACCGCGC TGGTGCTGGC CGTTGCAGGC GTGAAAGGCG TGCATGACCT GCGCACGCGC
GTGTCGGGCA ACCAGTGGTT TGTGCAACTG CACCTGGAAC TGCCGGGGCA ACTGCCGCTG
CATGAAGCGC ATAGCTTGTG CGTGGAGGCC TCGCGGGTGA TCCGCCAGCG TTACCCACAG
GCAGACGTGA TGGTGCACGC CGACCCGGTA TGA
 
Protein sequence
MITTPAEHQR LLRLATRASL AVAGILVLSK ALAWWLSGSV SLLAGLTDSA LDAVASFLNL 
LAVHYALRPA DDDHRFGHGK AEALAGMAQA LFIGGSAVLI GVQAVERLYT PQPLGDTSIG
IAVMLLSLVL TVALLALQYK VIRLTGSTAV RADSLHYRSD LLLNGSILLA LLLTRFGWPQ
LDALFGLGIA FYILWSALQI ARESTAILMD KALPGDVGED MTALVLAVAG VKGVHDLRTR
VSGNQWFVQL HLELPGQLPL HEAHSLCVEA SRVIRQRYPQ ADVMVHADPV