Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4683 |
Symbol | mrcB |
ID | 1044197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5320928 |
End bp | 5323249 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148086 |
Product | penicillin-binding protein 1B |
Protein accession | NP_746792 |
Protein GI | 26991367 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000305505 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGAA CCCGAAATCC CCGCACCCCT CAGAAACGCC CGACCGGCCG CTCCCGCGCC TGGCTGGGCT GGGCTTTGAA GCTCAGCCTG GTTGGCCTGG TGATCGTTGC CGGCTTCGCG GTTTACCTCG ATGCCGTCGT CCAGGAAAAG TTCTCCGGCA AGCGCTGGAC CATCCCGGCC AAAGTGTATG CCCGACCGCT GGAGCTGTTC ACCGGCCAGA AGTTGAGCAA GAACGACTTC CTCACCGAGC TCGATGCGCT CGGCTACCGT CGCGAAAGCG CGGCCAACGG CCCGGGCGCT GCGTCCGTCA ACGGCAATAC CGTCGACCTC AATACCCGTG GCTTCCAGTT CTACGAGGGC ATGGAACCGG CGCAGTTCGT CCGCGTGCGC TTCTCTGGCG ATTACGTTGC GGGCCTTTCC GGTGCCAACG GCAAGGCGCT TGACGTGGTG CGGCTGGAGC CGCTGATGAT CGGCGGCATC TACCCGAAAA ATCTCGAAGA CCGCATCCTG ATCAAGATCG ATCAGGTACC CAAATATCTG CTCGAAACCT TGGTGGCAAC GGAGGACCGC GAGTTCTACA GCCACTTCGG CGTGTCGCCA AAGTCCATCG TCCGGGCCAT GTGGGTCAAC ACGTCGTCCG GCTCGATGCG CCAGGGTGGC AGTACCCTGA CCCAGCAGTT GGTGAAGAAC TTCTACCTCA GCAGCGAGCG CAGCCTCAGC CGCAAGCTGA CCGAGGCGAT GATGGCGGTC CTGCTCGAAC TGCACTACGA CAAACGCGAA ATCCTTGAGG CCTACCTCAA CGAGGTGTTC GTCGGCCAGG ACGGTCAGCG CGCGGTGCAC GGCTTTGGTC TGGCTAGCCA GTTCTTCTTC AGCCAGCCGC TGTCCGAGCT GAAACTGCAT CAGATCGCCC TGCTGGTAGG CATGGTCAAA GGCCCGTCCT ACTACAACCC GCGGCGTCAC CCCGAGCGGG CCCTGGCTCG CCGCAACCTG GTGCTCGACC TGGTGGCCGA GCAGGGCGTG GCCAGCCAGG CAGAAGTCGA TGCGGCGAAG AAAATGCCGC TGGGCGTGAC CAAGCGTGGC AGCCTGGCCG ACAGCTCGTT CCCAGCCTTC CTCGACCTGG TCAAGCGACA GTTGCGCCAG GATTACCGCG ACGAGGACTT GACCGAAGAA GGCCTGCGCA TCTTTACCAG CTTCGACCCT ATCCTGCAGA TGAAGGCCGA AACCTCGATG AGCGAGACCT TCAAGCGCCT GGCGGGCCGC AAGGGGGCAG ACGATGTGGA AGCGGCGATG GTCGTGACCA ACCCTGAGAC CGGTGAAGTA CAGGCGCTGA TCGGTAGCCG CCAGGCAGGC TTCGCCGGCT TCAACCGGGC CATCGATGCT GTGCGGCCGA TCGGCTCGTT GGTCAAGCCG TCGGTATACC TGACTGCGCT GGAGCAGCCG AGCAAGTACA CCCTGACCAG TTGGGTGCAG GACGAGCCAT TTTCGGTCAA GGGCGCTGAC GGCCAAGTCT GGCGCCCGCA AAACTATGAC CGCCGCCCGC ATGGCACGAT CTACCTGTAC CAGGGGCTGG CCAACTCCTA CAACCTGTCG ACCGCCAAGC TCGGCCTGGA AGTGGGTGTG CCGAACGTGA TCAAGACCAT CGGTCGCTTG GGCGTGAATG TCGACTGGCC TGCATTCCCG GCCATGTTGC TGGGGGCAGG TGGCATGTCG CCGATGCAGG TGGCAACCAT GTACCAGACC ATCGCCAACG GTGGCTTCAA CACGCCGATG CGCGGCATCC GCAGCGTGCT CACCGCCGAG GGCGAGCCGC TCAAGCGCTA CCCGTTCCAG ATCCAGCAAA CCTTCGACCC AGGTGCCATT TACCTGGTGC AGAACGCCAT GCAACGCGTA ATGCGCGAAG GTACAGGGCG CTCGGTGTAC AACACCTTGC CACGCTCGCT GACCCTGGCG GGCAAGACCG GTACCAGTAA CGACTCGCGT GACAGCTGGT TCTCCGGCTT CAGTCAGGAT CTGCTGGCCG TGGTGTGGAT GGGGCGTGAC GATAACGGCA AGACACCGTT TACCGGCGCC ACCGGCGCCT TGCAGGTGTG GACCAGCTTC ATGAAGAAGG CCGACCCGCT GCCGCTGGAC ATGCCGCAAC CGGATAACGT GGTGCAGGCC TGGATCGACC CCTACAGTGG CCATGGGTCT GATGCCAGCT GTCCGGGAGC GGTGCAGATG CCGTATATTC GCGGGAGCGA ACCGCCGGCC GGCGCAGCCT GTGGCGGCGA GCAGGACCCA GTAGAATCGG TAATGGACTG GGTCAAAGGC TGGATGAATT AA
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Protein sequence | MTRTRNPRTP QKRPTGRSRA WLGWALKLSL VGLVIVAGFA VYLDAVVQEK FSGKRWTIPA KVYARPLELF TGQKLSKNDF LTELDALGYR RESAANGPGA ASVNGNTVDL NTRGFQFYEG MEPAQFVRVR FSGDYVAGLS GANGKALDVV RLEPLMIGGI YPKNLEDRIL IKIDQVPKYL LETLVATEDR EFYSHFGVSP KSIVRAMWVN TSSGSMRQGG STLTQQLVKN FYLSSERSLS RKLTEAMMAV LLELHYDKRE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF SQPLSELKLH QIALLVGMVK GPSYYNPRRH PERALARRNL VLDLVAEQGV ASQAEVDAAK KMPLGVTKRG SLADSSFPAF LDLVKRQLRQ DYRDEDLTEE GLRIFTSFDP ILQMKAETSM SETFKRLAGR KGADDVEAAM VVTNPETGEV QALIGSRQAG FAGFNRAIDA VRPIGSLVKP SVYLTALEQP SKYTLTSWVQ DEPFSVKGAD GQVWRPQNYD RRPHGTIYLY QGLANSYNLS TAKLGLEVGV PNVIKTIGRL GVNVDWPAFP AMLLGAGGMS PMQVATMYQT IANGGFNTPM RGIRSVLTAE GEPLKRYPFQ IQQTFDPGAI YLVQNAMQRV MREGTGRSVY NTLPRSLTLA GKTGTSNDSR DSWFSGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MKKADPLPLD MPQPDNVVQA WIDPYSGHGS DASCPGAVQM PYIRGSEPPA GAACGGEQDP VESVMDWVKG WMN
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