| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4654 |
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| Symbol | trmA |
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| ID | 1043741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5279780 |
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| End bp | 5280865 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148052 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | NP_746763 |
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| Protein GI | 26991338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG CTTTCGACCC CTCCTCCTAC GCCACCCAGC TGGATGCCAA AGTGGCCCGG
CTGCGCGAGC TGCTGGCACC GTTCGGCGCG CCGGAACCGG CTGTTTTCGA CTCACCGCGC
GAGCATTACC GCCTGCGCGC CGAGTTCCGC CTGTGGCGCG AGGATGGCCA GCGCCACTAC
GCCATGTTCG CCCCGGGCGA GAAGCACAAG GCAATCCTGA TCGACGATTT CCCCATTGCC
AGCGAACGCA TCAACGCGTT GATGCCGCGC CTGAAGGCAG CCTGGCAGGC CAGCGAAGAA
CTGGGCAACC GCCTGTTCCA GGTGGAGTTC CTCACCACCC TGGCTGGCGA TGCGATGATC
ACGATGTGCT ATCACCGCCC GCTGGACGAG GCCTGGGAAG TGGAAGCACG GCAACTGGCT
GAAGCGCTGG GGGTGAGCGT CATCGGCCGC TCCAAGGGCA AGCGCCTGGT TATCGGCCGC
GACTACGCGG TGGAAAAGCT TGATGTGGCT GGCCGCGTGT TCAGTTACCG CCAGCCGGAG
GGTGCGTTCA CCCAGCCCAA CGGCGCAGTG AACCAGAAGA TGCTCAGCTG GGCCTTCGAG
GCCATTGGCG AGCGTGAGGA TGACCTGCTG GAGCTGTATT GCGGCAACGG CAACTTCACC
CTGCCGCTGG CCACGCGTGT ACGCCAGGTG CTGGCCACCG AAATCAGCAA GACGTCGGTC
AATGCCGCCC TGAGCAACCT TGACGAAAAC GCTGTGGATA ACGTGCGGCT GGTACGTTTG
TCGGCAGAGG AGCTGACCCA GGCACTGAAT GAGGTGCGGC CGTTCCGTCG CCTGGAAGGC
ATCGACCTGA AGAGTTATCA GTTCGGTACC GTGTTCGTCG ACCCACCGCG TGCGGGGATG
GACCCGGATA CCTGCGAGCT GACCCGGCGT TTCGAGCGCA TTCTGTACAT CTCGTGCAAC
CCGGAAACGC TGGCAGCGAA CATTGCCCAG TTGCAGGACA CCCACCGCAT CGAGCGCTGT
GCATTGTTTG ACCAGTTCCC GTATACCCAC CATATGGAGA GTGGGGTTCT GCTGGTTCGG
CGCTGA
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| Protein sequence | MSAAFDPSSY ATQLDAKVAR LRELLAPFGA PEPAVFDSPR EHYRLRAEFR LWREDGQRHY
AMFAPGEKHK AILIDDFPIA SERINALMPR LKAAWQASEE LGNRLFQVEF LTTLAGDAMI
TMCYHRPLDE AWEVEARQLA EALGVSVIGR SKGKRLVIGR DYAVEKLDVA GRVFSYRQPE
GAFTQPNGAV NQKMLSWAFE AIGEREDDLL ELYCGNGNFT LPLATRVRQV LATEISKTSV
NAALSNLDEN AVDNVRLVRL SAEELTQALN EVRPFRRLEG IDLKSYQFGT VFVDPPRAGM
DPDTCELTRR FERILYISCN PETLAANIAQ LQDTHRIERC ALFDQFPYTH HMESGVLLVR
R
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