Gene PP_4645 details

Gene Information

• Locus tag: PP_4645
• Symbol: mscL
• ID: 1043039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 5270513
• End bp: 5270932
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637148043
• Product: large-conductance mechanosensitive channel
• Protein accession: NP_746754
• Protein GI: 26991329
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.51742
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCATGC TCAACGAGTT CAAGGCTTTC GCAGTCAAAG GCAATGTCGT CGACATGGCG 
GTCGGTATCA TCATCGGCGC GGCCTTCGGC AAGATCGTCT CGTCCTTCGT CGGCGACGTG 
ATCATGCCGC CACTGGGCCT GCTGATCGGT GGCGTGGACT TCAGCGATCT GGCCATTACC 
CTGAAGGCTG CCGAAGGTGA CGTACCAGCG GTGGTGCTGG CGTATGGCAA GTTCATCCAG 
ACCGTAATCG ACTTCGTGAT CGTGGCCTTT GCCATCTTCA TGGGCGTGAA GGCGATCAAC 
AAGCTCAAGC GTGAAGAAGC CGTGGCGCCG ACTACGCCGC CTGTGCCTTC GGCAGAAGAG 
ACGCTGCTGA CCGAAATCCG CGATTTGCTC AAGACGCAGA ACCAGAATCG CTTGCCTTGA 

 

Protein sequence

MGMLNEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPLGLLIG GVDFSDLAIT 
LKAAEGDVPA VVLAYGKFIQ TVIDFVIVAF AIFMGVKAIN KLKREEAVAP TTPPVPSAEE 
TLLTEIRDLL KTQNQNRLP