Gene PP_4617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4617 
Symbol 
ID1042591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5239293 
End bp5240312 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content63% 
IMG OID637148015 
Productleucine dehydrogenase 
Protein accessionNP_746726 
Protein GI26991301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCGC TGATGCAAAG CACCCGTACC CAGTCACTGC ACCTGTTCAA TGACCCGCCT 
ACGGGCCTGA AAGCCGTTGT GGCAATCCAC AGTGAGCATT TGGGCCCGGC CATGGGGGGG
TGCCGCTACC TGCCTTACGC CGATGACGAA AGCGCCATGA CCGACGCGAT TCGCCTGGCC
CAGGGCATGA GCTACAAGGC AGCACTGGCC GGCTTGCCGA TGGGGGGTGG CAAGGCGGTA
ATCATGCGCA ACCCGCATGT GGAAAACCGC GCAGCGCTGT TCGAGGCCTT TGGCCGCTTC
ATCGATACCT TGCATGGGCG CTTCATCATC GCCGTGGACA GTGGCACCTC GACCTTGGAC
ATGGACTGCA TTGCCCACAG CACGCCCTAC GTGACCAGCA CCACTGCATC GGGCGACCCA
TCGCCACATG CGGCGATGGG GGTGTTCGCG GGCATACGTG CCACAACCTC GTTCCGGCTG
GGCAGCGATG ACCTGAGAGG CTTGCGGGTA GCGGTCCAGG GGTTGGGCAA TGTTGGTTAT
GCCCTGGCGG AGCAATTGCA TGCGGTGGGC GCGGAGCTGC TGGTCAGCGA CTTGGACCCG
GGGCGGGTGC GGCTGGCGAT GGAGCAGTTC GATGCCAAAC CGGTGACCAA CGATGCGTTG
ATCAGTACCC CTTGCGATAT CTTTGCACCC TGCGGCGTGG GCCCGGTACT GAACGGGCAG
AGCGTGATGC AACTGCGTTG TGCGGCAGTG GCGGGGGCGG CCAACAACCA GCTGACTACC
TTGCAGGTGG CAGACCAGCT GGAGTCGCGC GGCATATTGT ATGCACCTGA CTACGTGATC
AATGCCGGTG GGCTGATCTA TGTGGCACTC ACCCACCGTG GCGAAGACCA GCGCACCATT
ACTGCGCACC TGGCGCGAAT CCCTTCACGG CTGACCGAAG TGTTTGGCCA TGCGCAGGCG
GAGAAGCGTT CGCCGGCAAG GGTGGCGCAG ATGTTGGCGG AGCGGTTGTT GTATGGCTGA
 
Protein sequence
MFALMQSTRT QSLHLFNDPP TGLKAVVAIH SEHLGPAMGG CRYLPYADDE SAMTDAIRLA 
QGMSYKAALA GLPMGGGKAV IMRNPHVENR AALFEAFGRF IDTLHGRFII AVDSGTSTLD
MDCIAHSTPY VTSTTASGDP SPHAAMGVFA GIRATTSFRL GSDDLRGLRV AVQGLGNVGY
ALAEQLHAVG AELLVSDLDP GRVRLAMEQF DAKPVTNDAL ISTPCDIFAP CGVGPVLNGQ
SVMQLRCAAV AGAANNQLTT LQVADQLESR GILYAPDYVI NAGGLIYVAL THRGEDQRTI
TAHLARIPSR LTEVFGHAQA EKRSPARVAQ MLAERLLYG