Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4591 |
Symbol | rnd |
ID | 1045092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5208999 |
End bp | 5210132 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147989 |
Product | ribonuclease D |
Protein accession | NP_746700 |
Protein GI | 26991275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCATCG AAATTCACTG GATCCGTGAC GACCAGAGCC TGGCCGAACA CTGCCGCGAC TGGCACCAAC TGCCCTTCGT CGCCGTCGAC ACCGAATTCA TGCGGGTAGA CACCTTTTAC CCGAAAGCCG GGCTGATCCA GATCGGCGAC GGCCAACGCG CCTTCCTGAT CGACCCGCTG CTGATCGGCA ACTGGCAACC CTTGGCCGAC CTGCTGGAAG ACAGCGCTGT GGTCAAGGTG CTGCACGCCT GCAGCGAAGA CCTCGAAGTG CTGCTGCGCC TGACCGGCAA GCTGCCTCAG CCGCTGTTCG ACACTCAGCT GGCCGCCGGT TACCTGAACC TGGGCTTCTC GATGGGCTAT TCGCGCCTGG TGCAGGAAGT GCTGGGCATC GAATTGCCCA AAGGCGAAAC CCGTTCCGAC TGGCTGCAAC GCCCGCTCTC GGAAACCCAG GTCAGCTACG CTGCCGAAGA TGCCGTGCAC CTGGCCGAGC TTTTCACCGT GCTGCGCCCG CGGCTGAGTG ACGACAAGTA TGCCTGGGTG CTGGAAGACG GCGCCGAGCT GGTGGCTGCG TTGCGCCGTG AAGTCGAGCC CGAAAGCCTG TACCGCGACG TCAAGCTGGC CTGGAAGCTG GCGCCTCAAC AACTGGCAGT GCTACGTGAG CTGTGCGCCT GGCGCGAACG CGAAGCGCGC AACCGCGATG TGCCGCGTAA TCGTATCCTC AAGGAGCACT CGCTGTGGCC CATGGCCAAA AGCCAGCCGA ACAACCTGTC GGCCTTGGCC AAGATCGACG AGATGCACCC GCGCACCATT CGTCAGGACG GTGAGTTCCT CATCCAGCTG ATCAAGCGCG CCGCCAGCCT GCCGGCCGAG CAATGGCCTG CGCCCTTGCC TGAGCCGCTT CCGATCGAGG CTGCTGGCCT TCTCAAGCAG CTGCGTGCCA TCGGCCAGGC CGAAGGCGAG CGCCTGGGGA TTGCACCCGA GCTGATGCTG CGCAAGAAAG CCCTGGAGGC GCTGCTCAAG AGCGGATACC CCAATGGCCC TTATCAACTG CCCGATTCGC TGCGCGGCTG GCGCCGTGAG CGCATGGGCC AGGCCCTGCT GGACAACCTG GCAGGTGCCG GAGAAACCCG ATGA
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Protein sequence | MAIEIHWIRD DQSLAEHCRD WHQLPFVAVD TEFMRVDTFY PKAGLIQIGD GQRAFLIDPL LIGNWQPLAD LLEDSAVVKV LHACSEDLEV LLRLTGKLPQ PLFDTQLAAG YLNLGFSMGY SRLVQEVLGI ELPKGETRSD WLQRPLSETQ VSYAAEDAVH LAELFTVLRP RLSDDKYAWV LEDGAELVAA LRREVEPESL YRDVKLAWKL APQQLAVLRE LCAWREREAR NRDVPRNRIL KEHSLWPMAK SQPNNLSALA KIDEMHPRTI RQDGEFLIQL IKRAASLPAE QWPAPLPEPL PIEAAGLLKQ LRAIGQAEGE RLGIAPELML RKKALEALLK SGYPNGPYQL PDSLRGWRRE RMGQALLDNL AGAGETR
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