| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4516 |
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| Symbol | recQ |
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| ID | 1041657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5129254 |
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| End bp | 5131401 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147915 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | NP_746626 |
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| Protein GI | 26991201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.121492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC AGGCTCAGCG CGTTCTCAAG GACATCTTCG GCTACGACAG TTTCCGTGGG
CGCCAGGCAG CGATCATCGA ATGCGTGGCC AATGGCGGCG ATGCCTTGGT ACTGATGCCC
ACCGGTGGCG GCAAATCGCT GTGTTTCCAG GTGCCGGGGC TGCTGCGCCC GGGCTTGACG
GTGGTGGTAT CGCCACTGAT CGCGCTGATG GACGACCAGG TCGCCACCCT TGACGAGCTG
GGTGTGTCTG CGGCCGCCCT GAACTCTACC CTGACGGCGG AGCAGCAGCG TGAACTGGCC
GGGCGCCTGC GCCGTGGTGA GGTCAAGATG CTGTACCTGG CGCCGGAACG CCTGGTGCAG
CCGCGCATGC TCGACTTCCT GCGCGATCTG GACATCTCGC TGTTCGCCAT TGACGAGGCC
CACTGCGTTT CGCAATGGGG GCACGATTTC CGCCCAGAGT ACCTGCAGCT GGGCCAGCTG
GCCGAACTGT TTCCGCATGT GCCGCGCATT GCGCTTACCG CTACGGCCGA CATGCGAACC
CGCGAGGAGA TCGTTCAGCG CCTGCACCTG CAAGGCGCCG AGCGCTTCCT GTCGAGTTTC
GACCGGCCCA ACATCTTTTA CCGCATCGTG CCCAAGGAGG CACCGCGCAA GCAGTTGATG
GCCTTCCTCG GCGAACGTCG TGGCAACGCT GGCATCGTCT ACTGCCTGTC GCGCAAGAAG
GTCGACGAAA CCGCCGCCTT CCTCTGTAGT CAGGGGTTCC CCGCGCTGCC GTATCACGCC
GGCCTGGCCG CCGAGACGCG GGCGGCCAAC CAGCATCGCT TCCTGAACGA GGAAGGGCTG
ATCATGGTCG CTACCATTGC TTTCGGCATG GGTATCGACA AGCCCAACGT GCGCTTCGTT
GCTCACCTCG ACCTGCCCAA ATCGCTTGAA GCCTACTATC AGGAAACCGG CCGGGCCGGC
CGTGACGGCC TGCCCTCCGA TGCCTGGATG GCCTACGGGC TGCAGGACAT GGTGATGCTC
AAGCAGATGC TGCAGAACTC CGAAGGCGAC GAGCGCCACA AGCGCATCGA GCAGCACAAG
CTGGACGCCA TGCTGGCGCT GTGCGAAGAA ACCCGCTGCC GCCGCCAGTC GCTGCTGGCG
TACTTCGACG AGATCCTCGA ACAACCGTGC GGGCACTGCG ACAACTGTGT CGACAACATC
CAGACCTGGG ACGCTACCGA GCCGGCCCGC CAGGCGCTGT CGGCGGTGTT CCGCACCGGC
CAGCGCTATG GTGTTGGCCA CCTGGTCGAT GTGCTGTTGG GCAAGGACAC CGAGAAGGTG
CGCAATTTCG GCCACGAGAA GCTGTCGGTA TTCGGCGTTG GCAAAGGCTT GGCCGAGGTC
GAGTGGCGCT CACTGTTCCG TCAGTTGGTG GCGCGCGGCC TGGTCGATAT CGACCTGGAA
GGCTACGGCG GCCTGCGCCT GTCCGACAGC TGCCGGCCGC TGCTGCGCGG CGAGGTGACC
TTGCAACTGC GCCGTGATCT CAAACCGCAG ACCACGGCCA AAACCTCGTC GTCCAGCGGC
GGCAGCCCGG CCAGCCAGCT GGTGCGTGCC GAAGAGCGCG ATCTGTGGGA AGCGCTGCGT
ACCCTGCGCC GCAAGCTGGC CGAAGAACAC AGTGTGCCGC CCTACGTCAT CTTCCCCGAC
TCGACACTGC TGGAGATGCT GCGCAGCCAG CCGGTCAGCC TCAGCGACAT GGCCCAGGTC
AGCGGTGTGG GGGCGCGCAA GCTGGAGCGC TACGGCCAGG CGTTCCTCGA AGTGCTGAAC
AACAGCGGTG GCACCGACGA GGCTCCGAAA GTGGTGCTCG ACCTGCGCCA CGAACTGGTC
AGCCTGGCCC GTGCCGGCAT GACCCCGGCG CAGATCGCCG GGCAGCTCAA CTGCAGCGAG
AAGAACGTGT ATAGCCTGCT GGCCGAGGCG TTGGGCCGCC AGGAGCTGAG TCTGGACCAG
GCCATCGACC TGCCGGAAGA CCTGATGATG GAGGTGCAGG ACGCCTTTCT TGATGGCGAG
GGTGAGCTGC CACCGGTGTC GGCCATTGCC CCGCAGTTCG GGGCGCGGGT GCCGGAGGGC
GTACTCTATT GCGTGCGCGC AGCACTGGCG GCGGAATTCG AATTGTAA
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| Protein sequence | MLEQAQRVLK DIFGYDSFRG RQAAIIECVA NGGDALVLMP TGGGKSLCFQ VPGLLRPGLT
VVVSPLIALM DDQVATLDEL GVSAAALNST LTAEQQRELA GRLRRGEVKM LYLAPERLVQ
PRMLDFLRDL DISLFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPHVPRI ALTATADMRT
REEIVQRLHL QGAERFLSSF DRPNIFYRIV PKEAPRKQLM AFLGERRGNA GIVYCLSRKK
VDETAAFLCS QGFPALPYHA GLAAETRAAN QHRFLNEEGL IMVATIAFGM GIDKPNVRFV
AHLDLPKSLE AYYQETGRAG RDGLPSDAWM AYGLQDMVML KQMLQNSEGD ERHKRIEQHK
LDAMLALCEE TRCRRQSLLA YFDEILEQPC GHCDNCVDNI QTWDATEPAR QALSAVFRTG
QRYGVGHLVD VLLGKDTEKV RNFGHEKLSV FGVGKGLAEV EWRSLFRQLV ARGLVDIDLE
GYGGLRLSDS CRPLLRGEVT LQLRRDLKPQ TTAKTSSSSG GSPASQLVRA EERDLWEALR
TLRRKLAEEH SVPPYVIFPD STLLEMLRSQ PVSLSDMAQV SGVGARKLER YGQAFLEVLN
NSGGTDEAPK VVLDLRHELV SLARAGMTPA QIAGQLNCSE KNVYSLLAEA LGRQELSLDQ
AIDLPEDLMM EVQDAFLDGE GELPPVSAIA PQFGARVPEG VLYCVRAALA AEFEL
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