| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4489 |
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| Symbol | phhR |
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| ID | 1042510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5100065 |
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| End bp | 5101624 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147889 |
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| Product | transcriptional regulator TyrR |
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| Protein accession | NP_746600 |
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| Protein GI | 26991175 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA AAGTCCATTG CCAGAACCGC ATTGGCATCC TGCGCGACAT CCTCAACCTG
CTGGTGGAGT ACGGCATCAA CGTACTGCGC GGCGAGGTGG GCGGTGATCA TGGCAACGCC
ATCTACCTGC ACTGCCCGAA CCTGATCAAC CTGCAATTTC AGGCCCTGCG GCCGAAGTTC
GAGGCCATTG CCGGGGTATT CGGCGTTAAG CGTGTGGGCC TGATGCCCAG CGAACGCCGG
CACATGGAGC TGAATGCGTT GCTGGGGGCG CTGGACTTCC CGGTGCTGTC GATCGACATG
GGCGGCAGCA TCGTTGCGGC CAACCGTGCA GCCGCGCAGT TGCTTGGCGT GCGGGTTGAT
GAGGTGCCGG GCATGCCGCT GGCGCGCTAC GTAGAAGACT TCGATCTTCC GGAGTTGGTG
CGGGCCAACA AGTCGCGCAT CAACGGCTTG CGCATCAAAG TCAAAGGTGA TGTGTTTCTG
GCCGATATCG CACCGCTGCA GTCCGAACAC GATGACAGCG AGGCGCTGGC CGGCGCGGTG
CTTACCCTGC ACCGTGCCGA CCGGATCGGC GAGCGTATCT ACAATGTGCG CAAGCAAGAG
CTGCGTGGCT TCGACAGCAT CTTCCAGAGC TCGCGGGTGA TGGCTGCCGT GGTGCGTGAA
GCGCGGCGCA TGGCGCCGCT GGATGCACCG TTGCTGATCG AGGGCGAAAC CGGAACCGGC
AAGGAGTTGC TGGCGCGTGC CTGCCACCTG GCCAGCCCGC GTGGGCAGTC GCCGCTGATG
GCGCTCAACT GCGCCGGGCT GCCCGAGTCG ATGGCCGAGA CTGAGCTGTT CGGTTACGGC
CCCGGGGCAT TCGAAGGGGC ACGGGCCGAA GGCAAGCTGG GGCTGCTGGA GTTGACTGCA
GGCGGCACGC TGTTCCTTGA CGGGGTAGGG GAGATGAGCC CGCGCTTGCA GGTAAAGCTG
CTGCGCTTTC TGCAGGACGG CTGCTTCCGT CGGGTAGGTA GCGATGAAGA GGTCTACCTG
GATGTGCGGG TGATTTGTGC AACCCAGGTC GATTTGTCCG AGTTGTGTGC CCGTGGCGAG
TTTCGCCAGG ACCTGTATCA CCGGCTCAAT GTACTGTCGC TGCACATTCC GCCTTTGCGC
GAATGCATGG ATGGTCTGGA GGGGTTGGTG CAGCATTTTC TCGATCAGGC CAGTCGGCAG
ATTGGCTGCG CCATGCCGCG CCTGGCACCG GCGGCAATGG ACAAACTTGG GCAGTATCAC
TGGCCAGGTA ATGTAAGGCA GTTGGAAAAC GTTTTGTTCC AGGCGGTTTC GTTATGTGAC
GGCGGCGTGG TTAAAAGCGA GCATATTCGT TTGCCGGATT ATGGCGTGCG GCAACCGTTG
GGCGAGTTTT CGCTGGAAGG GGATCTTTCG CAGATAGTCG GGCGCTTTGA AAAGGCGGTG
CTGGAAAGTT TGATGGGGGA GTTTCCCAGT AGTCGGGCCT TGGGCAAAAG ACTGGGTGTT
TCGCACACGA CAATTGCCAA CAAGTTGAGG GATTACTCGC TTAACAAGTC GGCGGATTAG
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| Protein sequence | MRIKVHCQNR IGILRDILNL LVEYGINVLR GEVGGDHGNA IYLHCPNLIN LQFQALRPKF
EAIAGVFGVK RVGLMPSERR HMELNALLGA LDFPVLSIDM GGSIVAANRA AAQLLGVRVD
EVPGMPLARY VEDFDLPELV RANKSRINGL RIKVKGDVFL ADIAPLQSEH DDSEALAGAV
LTLHRADRIG ERIYNVRKQE LRGFDSIFQS SRVMAAVVRE ARRMAPLDAP LLIEGETGTG
KELLARACHL ASPRGQSPLM ALNCAGLPES MAETELFGYG PGAFEGARAE GKLGLLELTA
GGTLFLDGVG EMSPRLQVKL LRFLQDGCFR RVGSDEEVYL DVRVICATQV DLSELCARGE
FRQDLYHRLN VLSLHIPPLR ECMDGLEGLV QHFLDQASRQ IGCAMPRLAP AAMDKLGQYH
WPGNVRQLEN VLFQAVSLCD GGVVKSEHIR LPDYGVRQPL GEFSLEGDLS QIVGRFEKAV
LESLMGEFPS SRALGKRLGV SHTTIANKLR DYSLNKSAD
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