Gene PP_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4380 
SymbolflgL 
ID1042471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4971981 
End bp4973546 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content61% 
IMG OID637147776 
Productflagellar hook-associated protein FlgL 
Protein accessionNP_746494 
Protein GI26991069 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATTT CAACTGCTCA GTTCTATGAG ACCAGCGCCA CTAGCTACTC CCAGAACTAC 
TCCAACTTGG CCAAGATTAC CGAACAGGTC ACCTCCAAAT CGCGCATCCA ATCGGCCGGT
GACGACCCGG TCGGCGCTGC GCGCCTGCTG GTGCTGCAGC AACAGAGCGC CTTGTTGGAG
CAGTACAGCG GAAACATGAC CACGGTCAAG AACGCCCTGC TGCAGGAAGA GAGCGTGCTA
TCGACCATCA ACGATGCCCT GCAGCGTGCC AGCGAGCTGG CGATCCAGGC GGGTAACGGG
GGCCTGAGCG ATGCCGACCG TACCTCGATC GCCAGCGAGA TCAAGGAAAT CGAAGCCAAC
GTGTTCGGTC TGCTGAACTC GCGCGATGCC AACGGCGACT ACATGTTTGG CGGCTCCAAG
TCGTCGACCC CGCCCTATGT GCGCAACGCC GACGGCACCT ACAGCTACCA GGGCGACCAG
ACCCAGCTGA GCCTGCAGGT GTCCGACACC TTGCGCCTGG CGACCAACGA CACCGGCTAC
AGCATTTTCG ACCAGGCCAC CAACAACAGC CGCACCCAGT CGAGCCTGGT AGCACCGTCG
CCGGATGACG GCAAGGTATT GCTGTCTGGC GGCCTGTTGA CCTCGGCCAC CACCTACGGC
AATCAGTTTG CCGCTGGTCA GCCGTATTCT GTCACCTTCA CCAGTGCCAC CGAGTACAGC
GTGAGGGATG CCGCCGGCAA TGACATCACC AATGAAACCG CCGGCAAGGG CAAGTTCGAC
GTCAATACCG AAGGCGGCAA GATGATCTCG CTGCGCGGTG TCGACTTCGA GATCAACCTG
AACCTGGCGG AAGGTGACGA TGCTGACGCC GTCGTTGCCG GCCATGTGTT CACCCTCGAA
GCCAAGCCCG ATACCCTCAC TGCGACGCGT AGCGCGGGCA ACCCGTCGAC GGCGCAGGTG
ACCGGCACCA GCGTTACCGA CCCGGAAGCT TACCGTAGCA CCTTCCCAAG CAACGGCGCG
GTGATCCGCT TCACCAGCGA CACCGAGTAT TCTCTGTATG CGCAGCCGTA CAGTGCCGAC
AGCAAGCCGA TTGGCTCGGG TACAGTAGGG GCGGGCAACG CAGTGACGGT GGCAGGCGTT
ACCTACCAGT TCGACAGCGC GCCGAAGCAA GGCGACCAGT TCTCGGTCAA TGCCAATACC
CATCGCACGC AGAACGTACT GGATACCTTG GGTCAGCTAC GCAGCGCTCT GGAAAAGCCG
CTGGACACGC CCGAGGCGCA GGCTGCACTG AAAACCGCCA CCGACTCGGC GATTTCCAAC
CTGGCCAGTG CCCGGGATCG TATCGACATT ACCCGTGGTT CGATCGGTGC GCGGGGCAAC
TCGCTGGATA TTCAGGCGCA GGAAAACGAA AGCCTGGGGC TGGCCAACCA AAGCACACAA
AGTGCCATTG GCGATACTGA CATGGCCTCG GCCACCATTC AGCTGACCCT GCAGCAGGCC
ATGCTTGAAG CTTCGCAACT GGCGTTTGCG CGCATTTCTC AGCTAAGCCT GTTCGACAAG
ATCTAA
 
Protein sequence
MRISTAQFYE TSATSYSQNY SNLAKITEQV TSKSRIQSAG DDPVGAARLL VLQQQSALLE 
QYSGNMTTVK NALLQEESVL STINDALQRA SELAIQAGNG GLSDADRTSI ASEIKEIEAN
VFGLLNSRDA NGDYMFGGSK SSTPPYVRNA DGTYSYQGDQ TQLSLQVSDT LRLATNDTGY
SIFDQATNNS RTQSSLVAPS PDDGKVLLSG GLLTSATTYG NQFAAGQPYS VTFTSATEYS
VRDAAGNDIT NETAGKGKFD VNTEGGKMIS LRGVDFEINL NLAEGDDADA VVAGHVFTLE
AKPDTLTATR SAGNPSTAQV TGTSVTDPEA YRSTFPSNGA VIRFTSDTEY SLYAQPYSAD
SKPIGSGTVG AGNAVTVAGV TYQFDSAPKQ GDQFSVNANT HRTQNVLDTL GQLRSALEKP
LDTPEAQAAL KTATDSAISN LASARDRIDI TRGSIGARGN SLDIQAQENE SLGLANQSTQ
SAIGDTDMAS ATIQLTLQQA MLEASQLAFA RISQLSLFDK I