Gene PP_4370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4370 
SymbolfliE 
ID1041797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4960485 
End bp4960817 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID637147766 
Productflagellar hook-basal body protein FliE 
Protein accessionNP_746484 
Protein GI26991059 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00634776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.821893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG GTGTTGAATT CAATCGTCTG ATGTTGGACA TGCGGGCCAT GCAGGCCGAT 
GCCATGTCGC TGCCCAAGGT AACTGCCGCC CCCGAGCTGG CGCCAGGGCA AAGCACCTTC
GCCGACATGC TCGGCCAGGC CATCGGCAAG GTGCATGAGA CGCAGCAAGC CTCGACCCAA
CTGGCCAACG CGTTCGAAAT CGGCAAGAGC GGCGTCGACC TGACTGACGT GATGATCGCT
TCGCAAAAGG CCAGCGTGTC GATGCAAGCC ATGACCCAGG TACGCAACAA GCTGGTCCAG
GCGTACCAGG ACATCATGCA GATGCCGGTT TGA
 
Protein sequence
MSQGVEFNRL MLDMRAMQAD AMSLPKVTAA PELAPGQSTF ADMLGQAIGK VHETQQASTQ 
LANAFEIGKS GVDLTDVMIA SQKASVSMQA MTQVRNKLVQ AYQDIMQMPV