Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4370 |
Symbol | fliE |
ID | 1041797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4960485 |
End bp | 4960817 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637147766 |
Product | flagellar hook-basal body protein FliE |
Protein accession | NP_746484 |
Protein GI | 26991059 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1677] Flagellar hook-basal body protein |
TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00634776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.821893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAAG GTGTTGAATT CAATCGTCTG ATGTTGGACA TGCGGGCCAT GCAGGCCGAT GCCATGTCGC TGCCCAAGGT AACTGCCGCC CCCGAGCTGG CGCCAGGGCA AAGCACCTTC GCCGACATGC TCGGCCAGGC CATCGGCAAG GTGCATGAGA CGCAGCAAGC CTCGACCCAA CTGGCCAACG CGTTCGAAAT CGGCAAGAGC GGCGTCGACC TGACTGACGT GATGATCGCT TCGCAAAAGG CCAGCGTGTC GATGCAAGCC ATGACCCAGG TACGCAACAA GCTGGTCCAG GCGTACCAGG ACATCATGCA GATGCCGGTT TGA
|
Protein sequence | MSQGVEFNRL MLDMRAMQAD AMSLPKVTAA PELAPGQSTF ADMLGQAIGK VHETQQASTQ LANAFEIGKS GVDLTDVMIA SQKASVSMQA MTQVRNKLVQ AYQDIMQMPV
|
| |