| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4341 |
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| Symbol | fliA |
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| ID | 1044726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4931476 |
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| End bp | 4932216 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147738 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | NP_746456 |
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| Protein GI | 26991031 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.779936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.695948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCA GCGGCTTCAA GATGTACAGC CGGGCGGCGA AGGACGCCCA GTACGAGCTG
ATCGAACGCT ACGCCCCGCT GGTCAAGCGC ATCGCCTACC ACCTGTTGGC GCGCTTGCCG
GCCAACGTGC AGGTCGAGGA CCTGATCCAG GCCGGCATGA TCGGCCTGCT GGAAGTGGCC
AACAAATACG ACGCCAGCAA GGGCGCCAGC TTTGAGACCT ACGCCGGCAT CCGCATTCGC
GGGGCCATGC TGGACGAAGT GCGCAAAGGC GACTGGGCGC CGCGTTCGGT ACACCGCAAC
ACCCGTATGG TCAGTGATGC CATGCGTGCG GTTGAAGCCA GAACAGGCCG TGACGCTAAA
GATCATGAAG TTGCTGCCGA ACTCCAATTG AGTCTCGATG ATTACTACGG GATCTTGAAC
GATACCCTGG GCAGCCGCCT GTTCAGCTTT GACGACCTGT TGCAGGACGG CGAGCACGAA
GGACTGCATG AGGATGGCGC CAGTGGCCAG GTCGAACCTG CGCGCGGCCT GGAGGAGGAG
CGCTTCCAGG CTGCCCTGAC CGAGGCCATC GCCAACCTGC CGGAGCGTGA GCGCCTGGTG
CTGGCGCTGT ACTACGACGA AGAGCTGAAC CTCAAGGAAA TCGGTGAGGT GCTGGGTGTC
AGCGAGTCGC GGGTCAGCCA GTTGCACAGC CAATGTGCCG CGCGCCTGCG CAGCCGCCTG
GGGGAATGGC GGGCGCGTTG A
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| Protein sequence | MNASGFKMYS RAAKDAQYEL IERYAPLVKR IAYHLLARLP ANVQVEDLIQ AGMIGLLEVA
NKYDASKGAS FETYAGIRIR GAMLDEVRKG DWAPRSVHRN TRMVSDAMRA VEARTGRDAK
DHEVAAELQL SLDDYYGILN DTLGSRLFSF DDLLQDGEHE GLHEDGASGQ VEPARGLEEE
RFQAALTEAI ANLPERERLV LALYYDEELN LKEIGEVLGV SESRVSQLHS QCAARLRSRL
GEWRAR
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