Gene PP_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4338 
SymbolcheA 
ID1041662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4927927 
End bp4930170 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content64% 
IMG OID637147735 
ProductCheA signal transduction histidine kinase 
Protein accessionNP_746453 
Protein GI26991028 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.505907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.523187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG GCGCCGATGA AGAAATCCTC CAGGATTTCC TGGTAGAGGC CGGCGAAATA 
CTTGAGCAAT TGTCCGAGCA ACTGGTCGAG CTGGAAAGCC GACCTGACGA TGCCGACCTG
CTCAATGCGA TCTTTCGCGG TTTCCACACT GTAAAAGGGG GCGCCGGCTT CCTTCAGCTG
AACGAGCTGG TGGAGTGCTG CCATATCGCC GAGAACGTGT TCGACGTCCT GCGCAAAGGT
GAGCGCCGGG TCGATGCGGA ACTGATGGAT GTGGTGCTCG AGGCACTGGA TACGGTCAAC
AGCATGTTCG GCCAGGTGCG CGAGCGTGCC GAAGTGACAC CGGCCACCCC GGCGCTGCTG
GCAGCGCTGT CGCGCCTGGC CGAACCTGGG GCAGCCGAAG CTGTTGCAGC GCCCGTACCG
GCACCGGTTG CCGACGTGGT GGCTGCAGCG CCGGCCGAGG CCGAGGAGCA ACACCAGGAC
ATCACTGACA GTGAGTTCGA GCAGTTGCTC GATTCGCTCG ATGCGATCAA GGCGCAAGCG
GCGGCCGACG AGCAGATGCA GGGCGAGACT GTCAGCGGTG CGGGTGATGA AATCACCGAC
GCCGAGTTCG AATCGCTGCT CGACCAGTTG CACGGCAAGG GCCAGTTCAA TGCCGAGGTC
GCCGCGCCAC CGGTTGCCGT CAGCAGCGAA GTGGTCAGTG ATGAGATCAC CGACGCCGAA
TTCGAATCGC TGCTCGACCA GTTGCATGGC AAGGGCACCT TCCAGGCTGG CGCCTTGCCA
GCCGCCCAGG CACCAGCACC TGCCGCGCCA GACAACAGCG CAGCCAGCGA TGAAATCAGC
GAGCACGAGT TCGAAGCCCT GCTGGACCAG TTGCACGGCA AGGGCAAGTT CGGTGGCGAT
GTTGCCGCTG TAGAAGCCCC GGCTGCTGTC CAGGCGCAAG CGCCGGCTGC CGCCAAGGCC
GAAAGCCAGC CGGTGGCCAA GCCCGCTGCC GCGCCAGCGC CTTCGCCGGC CAGCAAACCT
GCCGCGGCGC CTCGCGCGCC GGCCCCGGCC GCCGAGAAGC ACGCCGCCAG CGAAGCGGAA
ACCACCGTGC GCGTCGACAC CGCGCGCCTG GACGAGATCA TGAACATGGT CGGCGAACTG
GTGCTGGTGC GTAACCGCCT GGTGCGCCTG GGCCTGAACA GCGGCGACGA GGCCATGTCC
AAGGCCGTGT CCAACCTTGA CGTGGTCACC GCCGACCTGC AGACCGCGGT GATGAAAACC
CGTATGCAGC CGATCAAGAA GGTCTTCGGC CGCTTCCCGC GCCTGGTTCG CGACCTGGCG
CGCCAGCTGA AGAAAGAGAT CAATCTGGAA CTGGTCGGCG AAGAGACCGA CCTTGACAAG
AACCTCGTAG AAGCCTTGGC CGACCCGCTG GTGCACTTGG TGCGCAATGC GGTCGACCAC
GGTATCGAGA TGCCCGACGA GCGTGAAGCG TCTGGCAAGG CGCGTACCGG CCGCGTAGTG
CTGTCGGCCG AACAGGAAGG CGACCACATC CTGCTGTCGA TCTCGGACGA CGGCAAGGGC
ATGGACCCGA ACATCCTGCG CGCCAAGGCC GTGGAAAAGG GCCTGATGGA CAAGGACGCC
GCCGAGCGCC TGAGCGAGTC GGACTGCTAC AACCTGATCT TCGCCCCTGG CTTCTCGACC
AAGACCGAGA TTTCCGATGT GTCCGGGCGT GGCGTGGGCA TGGACGTGGT GAAAACCAAG
ATCTCCCAGC TCAACGGCTC GATCAACATT TTCTCGGCCA AGGGCCAAGG CTCCAAGATC
GTCATCAAGG TGCCGCTGAC CCTGGCGATC ATGCCCACCC TTATGGTGAT GCTGGGCAAC
CAGGCGTTTG CCTTCCCGCT GGTCAACGTC AACGAGATCT TCCACCTCGA CCTGTCGCGT
ACCAACGTGG TCGACGGCCA GGAAGTGGTG ATCGTGCGCG ACAAGGCGCT GCCGCTGTTC
TACCTCAAGC GCTGGCTGGT CCAGGGCCAG GTGCACGAAG AGCAGCACGA GGGCCACGTG
GTGATTCTGT CGGTCGGCAC CCAGCGCATC GGTTTTGTCG TCGACCAACT GGTGGGCCAG
GAAGAAGTGG TCATCAAGCC GCTGGGCAAG ATGCTGCAAG GCACCCCGGG CATGTCCGGG
GCCACCATTA CCGGCGACGG TCGCATCGCG TTGATTCTCG ACGTCCCGAG CATGCTCAAG
CGTTACGCCG CGCGGCGTAT TTGA
 
Protein sequence
MSFGADEEIL QDFLVEAGEI LEQLSEQLVE LESRPDDADL LNAIFRGFHT VKGGAGFLQL 
NELVECCHIA ENVFDVLRKG ERRVDAELMD VVLEALDTVN SMFGQVRERA EVTPATPALL
AALSRLAEPG AAEAVAAPVP APVADVVAAA PAEAEEQHQD ITDSEFEQLL DSLDAIKAQA
AADEQMQGET VSGAGDEITD AEFESLLDQL HGKGQFNAEV AAPPVAVSSE VVSDEITDAE
FESLLDQLHG KGTFQAGALP AAQAPAPAAP DNSAASDEIS EHEFEALLDQ LHGKGKFGGD
VAAVEAPAAV QAQAPAAAKA ESQPVAKPAA APAPSPASKP AAAPRAPAPA AEKHAASEAE
TTVRVDTARL DEIMNMVGEL VLVRNRLVRL GLNSGDEAMS KAVSNLDVVT ADLQTAVMKT
RMQPIKKVFG RFPRLVRDLA RQLKKEINLE LVGEETDLDK NLVEALADPL VHLVRNAVDH
GIEMPDEREA SGKARTGRVV LSAEQEGDHI LLSISDDGKG MDPNILRAKA VEKGLMDKDA
AERLSESDCY NLIFAPGFST KTEISDVSGR GVGMDVVKTK ISQLNGSINI FSAKGQGSKI
VIKVPLTLAI MPTLMVMLGN QAFAFPLVNV NEIFHLDLSR TNVVDGQEVV IVRDKALPLF
YLKRWLVQGQ VHEEQHEGHV VILSVGTQRI GFVVDQLVGQ EEVVIKPLGK MLQGTPGMSG
ATITGDGRIA LILDVPSMLK RYAARRI