Gene PP_4283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4283 
Symbol 
ID1041830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4873776 
End bp4874531 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID637147681 
ProductGntR family transcriptional regulator 
Protein accessionNP_746399 
Protein GI26990974 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AGCTGCAACC TCTGAAGAAA CCTGCACGAG TCGGCAAGGC CGGCCGCAGC 
GGTACCCAGG ACGACATCGT CTACGCGCAT ATTTTCGAGG CGATCCTCGA GCAGCGTCTG
GCTCCGGGCA CCAAGTTGAG CGAGGAAGCG CTGGGCGAGA TCTTTGGCGT CAGCCGCACC
ATCATCCGCC GCGCCTTGTC GCGCCTGGCC CACGAAAGCG TGGTGCTGCT GCGACCGAAC
CGCGGTGCGG TGGTGGCCAG CCCGACCGTC GAAGAGGCGC GCCAGGTGTT CTTCTCGCGG
CGCATGGTCG AACGCGCCAT CACCGAGCTG GCGGTGCAGC ATGCCACCCC CGAGCAGCTC
AACGAGCTGC GGCAGATGGT GCGCGAAGAG CGCGACAGCT TCTCGTGCGG TGACCGGGGT
GCCGGTATCC GCCTTTCCGG TGAGTTCCAC CTCAAGCTGG CCGAAGCGGC GGGCAATGCG
CCGCTGGTGA GTTTCCAGCG CAGCCTGGTC TCGCAGACTT CGCTGATCAT TGCCCAGTAC
GAAAGCGGCA ACCGCTCCCA CTGCTCTTAC GATGAACACA TGCAGCTCAT CGATGCCATC
GAGGCACGCG ATGCCGAGCA GGCGGTGAGC CTGATGATGC ATCACATGGA CCACATCGAC
AGCAAGCTGA ATCTGGACGA GGAGAGCGCC TCGGACGATT TGCATGCCGT GTTCTCGCAT
CTGTTGAAAA AACCCAAGGT TTCCGTCAAG GGTTGA
 
Protein sequence
MNEQLQPLKK PARVGKAGRS GTQDDIVYAH IFEAILEQRL APGTKLSEEA LGEIFGVSRT 
IIRRALSRLA HESVVLLRPN RGAVVASPTV EEARQVFFSR RMVERAITEL AVQHATPEQL
NELRQMVREE RDSFSCGDRG AGIRLSGEFH LKLAEAAGNA PLVSFQRSLV SQTSLIIAQY
ESGNRSHCSY DEHMQLIDAI EARDAEQAVS LMMHHMDHID SKLNLDEESA SDDLHAVFSH
LLKKPKVSVK G