Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4283 |
Symbol | |
ID | 1041830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4873776 |
End bp | 4874531 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147681 |
Product | GntR family transcriptional regulator |
Protein accession | NP_746399 |
Protein GI | 26990974 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0169615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC AGCTGCAACC TCTGAAGAAA CCTGCACGAG TCGGCAAGGC CGGCCGCAGC GGTACCCAGG ACGACATCGT CTACGCGCAT ATTTTCGAGG CGATCCTCGA GCAGCGTCTG GCTCCGGGCA CCAAGTTGAG CGAGGAAGCG CTGGGCGAGA TCTTTGGCGT CAGCCGCACC ATCATCCGCC GCGCCTTGTC GCGCCTGGCC CACGAAAGCG TGGTGCTGCT GCGACCGAAC CGCGGTGCGG TGGTGGCCAG CCCGACCGTC GAAGAGGCGC GCCAGGTGTT CTTCTCGCGG CGCATGGTCG AACGCGCCAT CACCGAGCTG GCGGTGCAGC ATGCCACCCC CGAGCAGCTC AACGAGCTGC GGCAGATGGT GCGCGAAGAG CGCGACAGCT TCTCGTGCGG TGACCGGGGT GCCGGTATCC GCCTTTCCGG TGAGTTCCAC CTCAAGCTGG CCGAAGCGGC GGGCAATGCG CCGCTGGTGA GTTTCCAGCG CAGCCTGGTC TCGCAGACTT CGCTGATCAT TGCCCAGTAC GAAAGCGGCA ACCGCTCCCA CTGCTCTTAC GATGAACACA TGCAGCTCAT CGATGCCATC GAGGCACGCG ATGCCGAGCA GGCGGTGAGC CTGATGATGC ATCACATGGA CCACATCGAC AGCAAGCTGA ATCTGGACGA GGAGAGCGCC TCGGACGATT TGCATGCCGT GTTCTCGCAT CTGTTGAAAA AACCCAAGGT TTCCGTCAAG GGTTGA
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Protein sequence | MNEQLQPLKK PARVGKAGRS GTQDDIVYAH IFEAILEQRL APGTKLSEEA LGEIFGVSRT IIRRALSRLA HESVVLLRPN RGAVVASPTV EEARQVFFSR RMVERAITEL AVQHATPEQL NELRQMVREE RDSFSCGDRG AGIRLSGEFH LKLAEAAGNA PLVSFQRSLV SQTSLIIAQY ESGNRSHCSY DEHMQLIDAI EARDAEQAVS LMMHHMDHID SKLNLDEESA SDDLHAVFSH LLKKPKVSVK G
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