| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4279 |
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| Symbol | xdhB |
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| ID | 1041885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4868250 |
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| End bp | 4870649 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147677 |
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| Product | xanthine dehydrogenase, XdhB subunit |
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| Protein accession | NP_746395 |
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| Protein GI | 26990970 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.229569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACC ATCACGTAGC CAAGAGCCAG GCCGAGATGG CCGAACTGTT CAGCCAGGAC
CTGACCACCG GGGTCGGCCG CGGCGTCAAG CACGACAGCG CCGACAAGCA TGTATCGGGG
GAGGCGCTGT ACATTGACGA TCGCCTGGAA TTCCCTAACC AGTTGCATGT GTATGCACGT
ACCGCCGACC GCGCCCATGC GCGCATCCTG CGCATCGACA CCACGCCGTG CTATGCCTTC
GAGGGTGTGC GTATCGCCAT CACCCACGAA GACATCCCCG GCCTGAAGGA CATCGGCCCG
GTGGTGGCCG GCGACCCGCT GCTGGCCATC GACAAGGTCG AGTTCTTCGG CCAGCCGGTG
CTCGCTGTCG CTGCCCGCGA TCTTGAAACC GCACGCAAAG CGGCCATGGC CGCCATCGTC
GAGTACGAAG ACCTGGAACC GGTGCTGGAC GTGGTCGAGG CGCTGCGCAA GAAGCACTTC
GTGCTCGATA GCCACACCCA TCAGCGCGGC GATTCGGCTG CCGCCCTGGC CAGCGCCCCG
CATCGCATTC AGGGCACCCT GCACATCGGC GGCCAGGAGC ACTTCTACCT GGAAACGCAG
ATTTCCTCGG TCATGCCTAC CGAAGACGGC GGCATGATCG TCTACTGCTC CACACAGAAC
CCCACCGAAG TGCAGAAACT GGTCGCCGAA GTACTCGACG TGCCGATGAA CAAGGTGGTG
CTGGACATGC GCCGCATGGG CGGCGGTTTT GGCGGCAAGG AAACCCAGGC CGCCAGCCCG
GCATGCTTGT GCGCGGTAAT TGCGCGCCTG ACCGGCCAGC CAACCAAGAT GCGCCTGCCG
CGGGTCGAAG ACATGACCAT GACCGGCAAG CGCCACCCGT TCTACGTCGA GTATGACGTG
GGCTTCGACG ACAACGGCCG GCTGCACGGT ATCAATTTCG ACCTGGCTGG CAACTGTGGC
TATTCGCCCG ACCTGTCCGG TTCGATCGTC GACCGTGCCA TGTTCCACTC CGACAACGCT
TACTACCTGG GCGATGCCAC CGTCCACGGC CACCGCTGCA AGACCAACAC CGCCTCCAAC
ACTGCCTACC GCGGCTTTGG CGGCCCACAG GGCATGGTCG CCATCGAGCA GGTGATGGAC
CATATCGCCC GTCATCTGGG CCGCGACCCG CTGGCCGTGC GCAAGGCCAA CTATTACGGC
AAGACCGAAC GCAACGTCAC CCACTACTAC CAGACCGTCG AGCACAACAT GCTCGAAGAG
ATGACCGCCG AGCTGGAGGC CAGCAGCGAC TACGCCGAGC GACGCGAGTC GATCCGCCGC
TTCAACGCCA ACAGCCCGAT CCTGAAGAAA GGCCTGGCAC TGACACCGGT CAAGTTCGGC
ATTTCGTTCA CCGCCACCTT CCTCAACCAG GCCGGTGCAC TGATCCATAT CTACACCGAC
GGCAGCATTC ACCTGAACCA CGGCGGCACC GAAATGGGCC AGGGCCTGAA CACCAAGGTG
GCCCAGGTGG TGGCGCAGAT CTTCCAGGTG GATTTCAGCC GCATCCAGAT CACCGCTACC
AACACCGACA AGGTGCCTAA CACCTCGCCT ACGGCTGCTT CCAGCGGCGC CGACCTGAAC
GGCAAGGCGG CGCAGAACGC CGCCGAAATC CTCAAGAAAC GCCTGACCGA GTTTGCCGCA
CGGCACTATC AAGTGACCGA GGAAGACGTC GAATTTCGCA ACGGCCATGT GCGGGTGCGC
GACCAGATCG TCAGCTTCGA GCAACTGGTG CAGCAGGCCT ACTTCGCCCA GGTGTCGCTG
TCCAGCACCG GGTTCTACCG CACGCCGAAG ATCTTCTACG ACCGCAGCCA GGCCCGCGGC
CGGCCGTTCT ACTACTTCGC CTTTGGCGCT GCCTGCGTGG AAGTGATCGT CGATACGCTG
ACCGGCGAAT ACAAGATGTT GCGCGCCGAC ATCCTGCACG ACGTGGGCGA TTCGCTGAAC
CCTGCGATCG ACATCGGCCA GGTGGAGGGT GGTTTCATCC AGGGCATGGG CTGGCTGACC
ACCGAAGAGC TGGTGTGGAA CGCCAAAGGC AAGCTGATGA CCAACGGCCC GGCCAGCTAC
AAGATCCCGG CCGTGGCCGA CATGCCACTG GACTTGCGGG TGAAGCTGGT GGAGAACCGC
AAGAACCCGG AAGACACCGT GTTCCACTCC AAGGCCGTGG GCGAGCCCCC GTTCATGCTC
GGCATTGCTG CCTGGTGTGC AATCAAGGAT GCCGTGGCCA GCCTGGCTGA TTACCGCGTG
CAGCCGCAGG TGGATGCGCC GGCAACGCCG GAGCGGGTGC TGTGGGGCTG CGAGCAGATG
CGCAAGGCAG TGGCTGAAAC ACAGTCGCGC GAACGGGAAC TGGAAACCAT CACCCCCTGA
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| Protein sequence | MSNHHVAKSQ AEMAELFSQD LTTGVGRGVK HDSADKHVSG EALYIDDRLE FPNQLHVYAR
TADRAHARIL RIDTTPCYAF EGVRIAITHE DIPGLKDIGP VVAGDPLLAI DKVEFFGQPV
LAVAARDLET ARKAAMAAIV EYEDLEPVLD VVEALRKKHF VLDSHTHQRG DSAAALASAP
HRIQGTLHIG GQEHFYLETQ ISSVMPTEDG GMIVYCSTQN PTEVQKLVAE VLDVPMNKVV
LDMRRMGGGF GGKETQAASP ACLCAVIARL TGQPTKMRLP RVEDMTMTGK RHPFYVEYDV
GFDDNGRLHG INFDLAGNCG YSPDLSGSIV DRAMFHSDNA YYLGDATVHG HRCKTNTASN
TAYRGFGGPQ GMVAIEQVMD HIARHLGRDP LAVRKANYYG KTERNVTHYY QTVEHNMLEE
MTAELEASSD YAERRESIRR FNANSPILKK GLALTPVKFG ISFTATFLNQ AGALIHIYTD
GSIHLNHGGT EMGQGLNTKV AQVVAQIFQV DFSRIQITAT NTDKVPNTSP TAASSGADLN
GKAAQNAAEI LKKRLTEFAA RHYQVTEEDV EFRNGHVRVR DQIVSFEQLV QQAYFAQVSL
SSTGFYRTPK IFYDRSQARG RPFYYFAFGA ACVEVIVDTL TGEYKMLRAD ILHDVGDSLN
PAIDIGQVEG GFIQGMGWLT TEELVWNAKG KLMTNGPASY KIPAVADMPL DLRVKLVENR
KNPEDTVFHS KAVGEPPFML GIAAWCAIKD AVASLADYRV QPQVDAPATP ERVLWGCEQM
RKAVAETQSR ERELETITP
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