Gene PP_4269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4269 
SymboldnaX 
ID1041637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4853024 
End bp4855099 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content64% 
IMG OID637147667 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionNP_746385 
Protein GI26990960 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTCTTGC ACGAAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC 
CAGACCCATG TGCTCAAGGC CTTGATCAAT GCCTTGGACA ACCAGCGCCT GCACCATGCC
TACCTGTTCA CCGGTACCCG CGGGGTGGGC AAGACGACCA TCGCCCGTAT TATCGCCAAG
TGCCTGAACT GTGAAACCGG CATCACCTCC ACGCCCTGTG GCACCTGTTC GGTGTGCCGG
GAAATCGACG AAGGCCGTTT CGTCGACCTG ATCGAGATCG ACGCCGCCAG CCGTACCAAG
GTAGAGGACA CTCGCGAACT GCTCGATAAC GTGCAGTACG CCCCTAGCCG TGGGCGCTTC
AAGGTCTACC TGATCGACGA AGTGCACATG CTCTCGACCC ACTCATTCAA CGCCTTGCTC
AAGACGCTGG AAGAGCCGCC GCCCTACGTC AAGTTCATCC TCGCCACCAC CGACCCGCAG
AAGCTGCCGG CCACCATCCT GTCGCGCTGC CTGCAGTTCT CGTTGAAGAA CATGAGCCCG
GAGCGGGTGG TGGAGCACCT CAGCCACGTA CTTGCCGCCG AGAACGTGCC GTTCGAGGAA
GATGCCCTGT GGCTGCTGGG GCGGGCGGCC GACGGCTCCA TGCGTGATGC CATGAGCCTG
ACCGACCAGG CCATCGCCTT CGGTGAAGGC AAGGTACTGG CCGCCGATGT ACGTGCCATG
TTGGGTAGCC TCGACCATGG CCAGGTGTAT GGGGTCTTGC AGGCACTGCT CGAAGGCGAT
GCCAGGGCTT TGCTGGAGGC CGTGCGTAAT CTGGCCGAGC AAGGGCCGGA CTGGTCGGGC
GTTCTGGCCG AAATGCTCAA TGTGCTGCAC CGTGTAGCCA TTGCCCAGGC GCTGCCCGAA
GCGGTAGACA ACGGCCAGGG TGATCGCGAG CGGGTATTGG CGCTGGCTTC GGCGCTGCCG
GCCGAGGATG TGCAGTTCTA TTATCAGATG GGCCTGATTG GCCGCCGTGA TCTGCCCCTT
GCGCCGGACC CGCGCGGTGG CTTCGAGATG GTGCTGCTGC GTATGCTGGC GTTCCGCCCG
GCAGACACGG ACGACGCACC GAAGCCGGTG CTAAAGCCAA CGGGGATCAG CCAGGCCACA
GCTGATCCTG CAGGGCAGGT GGCAGCTGCG GCGCCGGTCG CGCTTTCACC GCCTGTCGCG
GCTGTGCCGG CGGAGCCTGT TGCGCAAGCC CCGCAGCTGG AGGTGCCAGC ACCCGCGACG
GCTGATCATG AGCCGGAGGC CGAGGCAGAT GTTGAGCTGA AGGCCGAAGC CGAGGCCATC
TCCGTACCTG AGCCGGTCGC CGAAGTGGTC GACCTGCCGT GGGAAGAGCC TGCCGTTGCC
CCCGCGCCGT TAGCGGCTGA ACCTGCGCCT GAACCGGCAC CTGCGCCCGA GCCTGTTGCC
CCGGTGGCGC CCACACAGGC CGCCCCGGCA CACGACGAGC CGCCTTTCGA CCCGTCTGCC
TACGCTGCCG TGGGGATGGA GCGCGACGAT GAGCCGCCGC TTGACGAAGA CTATTACGGT
GGCGAAAGCG ATCCGGCAGG TTTCAGCTAC CTGGACGAAT TGGCCGAACA TGTTCAGGAA
GACGTGTCCA AACCGGCTGC CGAACCGTTG CCGGCAGCCA AACCGGCCAC CGGCCTGGCC
TTGCAATGGC TGGAATTATT CCCACAGTTG CCTGTGTCCG GGATGACAGG CAACATCGCG
GCAAACTGTA CGCTGATTGC CGCCGATGGC GACGACTGGT TGCTGCACCT GGACCCTGGC
CAGGGGGCGC TGTTCAACGC CACCCAGCAG CGGCGCCTGA ACGAAGCGCT CAACCAGCAC
CTGGGGCGCA CGCTGAACCT GCGCATCGAG CTGATCCTGC CAGAGCAGGA AACCCCGGCT
CAGGCGGCGG CACGCAAGCG AGCCGAGCGC CAGCAGGACG CCGTCGCGTC GATCGAGCAG
GATCCGTTGA TCCAGCAGAT GATCAAGTTG TTCGGCGCCA AGGTGCGGCA GGATACTATT
GAGCCTGTAG AAGCCCTGGC TAGTCAGGGC CAGTAA
 
Protein sequence
MSYQVLARKW RPRSFREMVG QTHVLKALIN ALDNQRLHHA YLFTGTRGVG KTTIARIIAK 
CLNCETGITS TPCGTCSVCR EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF
KVYLIDEVHM LSTHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMSP
ERVVEHLSHV LAAENVPFEE DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVLAADVRAM
LGSLDHGQVY GVLQALLEGD ARALLEAVRN LAEQGPDWSG VLAEMLNVLH RVAIAQALPE
AVDNGQGDRE RVLALASALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP
ADTDDAPKPV LKPTGISQAT ADPAGQVAAA APVALSPPVA AVPAEPVAQA PQLEVPAPAT
ADHEPEAEAD VELKAEAEAI SVPEPVAEVV DLPWEEPAVA PAPLAAEPAP EPAPAPEPVA
PVAPTQAAPA HDEPPFDPSA YAAVGMERDD EPPLDEDYYG GESDPAGFSY LDELAEHVQE
DVSKPAAEPL PAAKPATGLA LQWLELFPQL PVSGMTGNIA ANCTLIAADG DDWLLHLDPG
QGALFNATQQ RRLNEALNQH LGRTLNLRIE LILPEQETPA QAAARKRAER QQDAVASIEQ
DPLIQQMIKL FGAKVRQDTI EPVEALASQG Q