Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4258 |
Symbol | ccoP-2 |
ID | 1041696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4841878 |
End bp | 4842855 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147656 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | NP_746374 |
Protein GI | 26990949 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.816603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCT TCTGGAGTCT GTACGTTACC GTCCTGACCC TGGGCACCAT CTTCTCGTTG ACCTGGCTGC TGCTGTCGAC CCGCAAGGGC CAGCGCGAAG AGGTTACCGA CGAAACCGTC GGGCATGCCT TCGATGGCAT CGAGGAATAC GACAACCCGC TGCCGCAATG GTGGTTCTGG CTGTTCGTCG GCACCATCGT CTTCGCCCTC GGTTACCTGG TGCTGTACCC GGGCCTGGGC AACTGGAAAG GCGTCCTGCC GGGCTATTCG TACCTGGATA ACGACAAGCA GACCGAGTTT TCCAACGGCC AGCCGGGCTG GACCGGCGTG CATGAATGGG AAAAGGAAAT GGCCAAGGCC GACGCCCGCT TCGGGCCGAT CTTCGCCAAG TTCGCGGCCA TGCCGATCGA AGAAGTGGCC AAGGACCCGC AGGCATTGAA AATGGGTGCG CGGCTGTTCG CCTCCAACTG CTCGGTGTGC CACGGTTCCG ACGCCAAGGG CGCCTTCGGC TTCCCCAACC TCACCGACAA TGACTGGCGC TGGGGCGGCG AGCCGGAAAC CATCAAGACC ACCATCATGG CCGGTCGCCA TGGCGTGATG CCGGCCTGGG CCGAAGTGAT CGGTGACCAG GGCGTGGCCG ATGTGGCTGC GTTCGTGGTC AGCAAACTCG ATGGCCGCAC ACTGCCTGAG GGTGCGAAGG CCGATGTGGA GAACGGGCAG AAGATCTTCG CAGCCAACTG CGTGGCCTGC CACGGGCCGG AAGGCAAAGG TACGCCCGCC ATGGGCGCTC CGAACCTGAC CCACCCGCAG GCGTTCATCT ACGGCTCGAG CTTTGCCCAG TTGCAGCAGA CCATTCGTTA TGGCCGCCAG GGGCAGATGC CGGCCCAGGA ACAACTGCAG GGCAACGACA AGGTGCACTT GCTGGCGGCT TACGTCTACA GCCTGTCGCA CCAGGCTGAG CCGGCCAAGG CTGAGTAA
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Protein sequence | MTTFWSLYVT VLTLGTIFSL TWLLLSTRKG QREEVTDETV GHAFDGIEEY DNPLPQWWFW LFVGTIVFAL GYLVLYPGLG NWKGVLPGYS YLDNDKQTEF SNGQPGWTGV HEWEKEMAKA DARFGPIFAK FAAMPIEEVA KDPQALKMGA RLFASNCSVC HGSDAKGAFG FPNLTDNDWR WGGEPETIKT TIMAGRHGVM PAWAEVIGDQ GVADVAAFVV SKLDGRTLPE GAKADVENGQ KIFAANCVAC HGPEGKGTPA MGAPNLTHPQ AFIYGSSFAQ LQQTIRYGRQ GQMPAQEQLQ GNDKVHLLAA YVYSLSHQAE PAKAE
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