Gene PP_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4198 
Symbol 
ID1044900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4744013 
End bp4744825 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID637147597 
ProductOmpA/MotB domain protein 
Protein accessionNP_746315 
Protein GI26990890 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC GTACGCCTTT GGCTGCACTG GCATTGCTGG CGCTGACGGC AGGTTTGCAA 
GGTTGCGCCA GTCAGCGCAG CAGTGCCGCG CTGGATGAGG CCACCGTTGC CTTCCAGGGG
GTCAAAGATG ATTCCGATGT GCTGCGCAGC GCGCCGCGTG ACGTGATTCG GGCGGGTGAG
TCGCTGGCTC GCGCCGAGCG CCTGTCCAGT TACATCGGCA CCGGTTCCGA TGTGCGGCAT
TATGCTTACC TCAGCCAGCG CTACAGCGAG ATTGCCCGCG AGCATGCCAA GCTGGCGCTG
AACCAGGAGC GCCAGGCCAA GCTCGACCTG GAGCGCCAGC GCCTGCAGCT GGCCTTGCGT
GAGGCCAAAC TGGCCAGCGT GCAGCAGCAG GGCAAGTGGG TCGAGTCGCA GATTGCCGCG
TTGGCTTCGG AGCAGGCCGA CCGTGGCTTG GTGATGACCT TGGGCGATGT GCTGTTCGAT
ACCGGCAGTG CCGACCTGAA GAACTCGGCC AGCCGGACTG TGCTCAAGCT GGTGCAGTTC
CTGCAGCTCA ACCCGCGCCG GGTAGTGCGT ATTGAGGGCT ATACCGACAG TACTGGCGCG
GGCGAGGAGA ATCTCAAGCT GTCGCGCGAC CGGGCGCAGT CCGTGGCTGA CATGCTTGTG
GACCTGGGCA TCGACGAAAA GCGCCTGCAG GTTGAAGGCT ATGGCGACCA GTACCCGATC
GAGGCCAATG CTTCGGAGCG GGGCAGGGCG CAGAACCGTC GGGTGGAGAT CGTATTCTCC
GATGACAAGG GGCGGCTCGC ACCGGCGCGC TGA
 
Protein sequence
MIRRTPLAAL ALLALTAGLQ GCASQRSSAA LDEATVAFQG VKDDSDVLRS APRDVIRAGE 
SLARAERLSS YIGTGSDVRH YAYLSQRYSE IAREHAKLAL NQERQAKLDL ERQRLQLALR
EAKLASVQQQ GKWVESQIAA LASEQADRGL VMTLGDVLFD TGSADLKNSA SRTVLKLVQF
LQLNPRRVVR IEGYTDSTGA GEENLKLSRD RAQSVADMLV DLGIDEKRLQ VEGYGDQYPI
EANASERGRA QNRRVEIVFS DDKGRLAPAR