Gene PP_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4178 
Symbol 
ID1042374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4720869 
End bp4721594 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID637147577 
Productdienelactone hydrolase 
Protein accessionNP_746295 
Protein GI26990870 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.119095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG TAATCGTCGA ATCGCTGGTT TATCACCTGT CTGGCAAGAC CTACGAAAGC 
CGTTTGGTCT ATGAGCCGGG TGCGCTGGGC CGCCCAGGGC TGGTGATGGC GCCGAACTGG
ATGGGCATTG GTGAAGGTGC CGAGCGCATT GCCAAGGAAG TGGCCGAGAA GGGCTATGTG
GTGCTGATCG CCGACCTGTA CGGGCAATCG GTGCGCCCGT CCAATGCCGA TGAGGCAGGC
GTGGCGATGA TGCCGCTGAA GAATGACCGT GGCGAACTGC GCAAGCGCAT GCAGGAGGCC
TTGGCGCAAT TGCTGGGGCA GTCGAAGGCG TTGCTGGAGC CTGGCAAGGT GGCCACCTTC
GGCTTCTGCT TCGGTGGCTG CTGTGCCTTG GAACTGGCCC GTAGCGGCGC CGACCTGCGT
GCGGCCGTGT CGTTCCACGG CACCCTGGAC ACGCCGAATC CTGAAGATGC CAAGCGCATC
AAGGGCTCGG TGCTGGTGTT GCATGGTGCC TCCGATCCAT TGGTGCCTAA AGAGCAGCTG
CCGGCATTCG AAGACGAGAT GAACGCGGCC AAGGTGGACT GGCAGTTGCT CAGTTACGGC
GGCGCGGTGC ACTCGTTTAC CGACCCGAAT GCCAATATGC CGGGCAAGAT GCAGTATGAC
CGGCGCACTT CCGAGCGAGC GTTTCGTTCG ATGCATAATC TGCTGAGTGA AGTGTTCCAG
CGTTGA
 
Protein sequence
MSKVIVESLV YHLSGKTYES RLVYEPGALG RPGLVMAPNW MGIGEGAERI AKEVAEKGYV 
VLIADLYGQS VRPSNADEAG VAMMPLKNDR GELRKRMQEA LAQLLGQSKA LLEPGKVATF
GFCFGGCCAL ELARSGADLR AAVSFHGTLD TPNPEDAKRI KGSVLVLHGA SDPLVPKEQL
PAFEDEMNAA KVDWQLLSYG GAVHSFTDPN ANMPGKMQYD RRTSERAFRS MHNLLSEVFQ
R