Gene PP_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4174 
SymbolfabA 
ID1042381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4716908 
End bp4717423 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content60% 
IMG OID637147573 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionNP_746291 
Protein GI26990866 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC AACACGCCTT TACTCGGGAA GACCTGCTGC GCTGCAGTCG CGGTGAGCTG 
TTCGGCCCAG GTAATGCGCA ACTGCCCGCG CCGAACATGC TGATGGTCGA TCGCATCACC
CATATCAGCG AAGAAGGCGG CAAGTACGGC AAAGGTGAAT TGGTCGCCGA GCTGGATATC
AACCCGGACC TGTGGTTCTT CGCCTGCCAT TTCGAAGGCG ATCCGGTAAT GCCGGGCTGC
CTGGGCCTCG ACGCCATGTG GCAGCTGGTT GGCTTCTTCC TCGGCTGGCA GGGCCTGCCG
GGCCGTGGCC GCGCCCTGGG TTCGGGCGAG GTGAAATTCT TTGGCCAGGT ACTGCCTGAA
GCCAAGAAAG TCACGTACAA CATTCACATC AAGCGCGTCC TGAAGGGCAA GCTGAACATG
GCCATCGCCG ATGGTTCGGT CAGCGTCGAC GGCCGCGAGA TCTACACTGC CGAAGGCCTG
CGGGTCGGCG TGTTCACCTC CACTGACAAT TTCTAA
 
Protein sequence
MTKQHAFTRE DLLRCSRGEL FGPGNAQLPA PNMLMVDRIT HISEEGGKYG KGELVAELDI 
NPDLWFFACH FEGDPVMPGC LGLDAMWQLV GFFLGWQGLP GRGRALGSGE VKFFGQVLPE
AKKVTYNIHI KRVLKGKLNM AIADGSVSVD GREIYTAEGL RVGVFTSTDN F