Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4161 |
Symbol | kdpA |
ID | 1042353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4703468 |
End bp | 4705162 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147560 |
Product | potassium-transporting ATPase subunit A |
Protein accession | NP_746278 |
Protein GI | 26990853 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2060] K+-transporting ATPase, A chain |
TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.222505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGTT ACGATTTCGC CTTGCTCTTG GCATTCTTTG TCATCGTGCT GCTACCGGCA CCCTGGCTCG GGCGGTTCTA CTACAAGGTC ATGGAAGGCC AGCGTACCTG GCTGACCCCT GTGCTGGGGC CGGTCGAGCA GGGCTGTTAC CGGCTGGCGG GTGTGAACGC CAGCCAGGAG CAGAACTGGC GGCAATACAC CCTGGCCCTG TTGGCGTTCA ACCTGGTCGG CTTCCTGCTG CTGTTCGCCG TGCTGCTGTT GCAGGGCTAC CTGCCACTCA ACCCTCAGAA CCTGCCTGGC CAGGAATGGT CACTGGCGTT CAACACCGCC GTCAGTTTCG TTACCAACAC CAACTGGCAG GCCTACAGCG GTGAGGCGTC GGTCAGCTAC CTGAGCCAGA TGCTTGGCCT GACCGTGCAG AACTTTGTCA GCCCTGCCAC CGGCCTGGCC GTACTGGTTG TCCTGTGCCG CGGTATCGCC CGGCGCAGCG CGACGACGCT GGGCAACTTC TGGGTCGACA TGACCCGTGC CACCCTCTAC GGCCTGCTGC CGCTTTGCTT GCTGCTGGCG CTGCTGCTGG TATGGCAGGG CGTACCGCAG ACCTTTGCCG ACTACGCCCA CGCGCTGACC TTGCAAGGGG CCGACCAGAC CATTCCGCTG GGGCCGGCCG CCAGCCAGAT CGCCATCAAG CAGCTGGGTA CCAATGGCGG TGGCTTCTTC GGCGTCAACT CGGCGCACCC GTTCGAAAAC CCAACGGCCT GGAGCAACCT GTTCGAGGTG GCATCGATCA TCCTCATTCC AGTGGCATTG GTGTTCACCT TCGGTCACTA CGTGAAGGAC CTGCGTCAGA GCCGCGCCAT CCTCGCCTGC ATGCTTGCCC TGTTCCTGAT CGGTGGCAGC ACGGCGCTGT GGTCCGAGCA TCAGCCGAAC CCGGCCCTGG AAAGCACGCA GGTGCAACAG ACCGCCCCTC TGGAGGGCAA GGAAAGCCGC TTCGGTACCA CCGGTTCGGT GCTGTGGGCG GTCACCACCA CCGCTGCCTC CAACGGTTCG GTCAACGCCA TGCACGACAG CCTGAACCCG CTGACCGGTA TGGTGGCGAT GGTCAACATG ATGGTCGGCG AGGTGATATT CGGCGGCGTC GGCGCGGGCC TCTACGGCAT GCTGCTGTTC GTCCTTATCG CGGTGTTCCT GGCCGGGCTG ATGATTGGCC GTACCCCGGA ATACCTGGGC AAGAAGCTGC AGGCCCGTGA AGTGCAGCTT CTGGTGGCAA CCCTGCTGGT GATGCCGGTT GGCGTGCTGG TACTTGGCGC CATCGCCGCC AGCCTGCCCG GCCCGGCCGG GGCGGTCACC AACCCGGGGG CGCATGGTTT CAGCCAGTTG CTGTACGCCT ATACCTCGGG CTCGGCCAAC AACGGCTCGG CCTTTGCCGG GTTTGGCGCC AACACCGTGT ACCACAACCT GATGATCGGC CTGGCCATGC TCATCGGCCG CTTCGGCTAC ATCCTGCCGA TACTGGCGTT GGCCGGCAGC CTGGCGGCGA AAAAAAGCGC GCCGCTGGGG CAGAACAGCT TCCCGACTCA CGGCCCGCTG TTCACCGGCT TGCTGCTGGT GACCATCCTG CTGGTCGGTG GCCTGACCTT CCTGCCGACC CTGGCCCTTG GGCCAATCGC CGAACACCTT AGCTTGGGTT TTTGA
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Protein sequence | MHSYDFALLL AFFVIVLLPA PWLGRFYYKV MEGQRTWLTP VLGPVEQGCY RLAGVNASQE QNWRQYTLAL LAFNLVGFLL LFAVLLLQGY LPLNPQNLPG QEWSLAFNTA VSFVTNTNWQ AYSGEASVSY LSQMLGLTVQ NFVSPATGLA VLVVLCRGIA RRSATTLGNF WVDMTRATLY GLLPLCLLLA LLLVWQGVPQ TFADYAHALT LQGADQTIPL GPAASQIAIK QLGTNGGGFF GVNSAHPFEN PTAWSNLFEV ASIILIPVAL VFTFGHYVKD LRQSRAILAC MLALFLIGGS TALWSEHQPN PALESTQVQQ TAPLEGKESR FGTTGSVLWA VTTTAASNGS VNAMHDSLNP LTGMVAMVNM MVGEVIFGGV GAGLYGMLLF VLIAVFLAGL MIGRTPEYLG KKLQAREVQL LVATLLVMPV GVLVLGAIAA SLPGPAGAVT NPGAHGFSQL LYAYTSGSAN NGSAFAGFGA NTVYHNLMIG LAMLIGRFGY ILPILALAGS LAAKKSAPLG QNSFPTHGPL FTGLLLVTIL LVGGLTFLPT LALGPIAEHL SLGF
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