Gene PP_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4161 
SymbolkdpA 
ID1042353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4703468 
End bp4705162 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content64% 
IMG OID637147560 
Productpotassium-transporting ATPase subunit A 
Protein accessionNP_746278 
Protein GI26990853 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.222505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGTT ACGATTTCGC CTTGCTCTTG GCATTCTTTG TCATCGTGCT GCTACCGGCA 
CCCTGGCTCG GGCGGTTCTA CTACAAGGTC ATGGAAGGCC AGCGTACCTG GCTGACCCCT
GTGCTGGGGC CGGTCGAGCA GGGCTGTTAC CGGCTGGCGG GTGTGAACGC CAGCCAGGAG
CAGAACTGGC GGCAATACAC CCTGGCCCTG TTGGCGTTCA ACCTGGTCGG CTTCCTGCTG
CTGTTCGCCG TGCTGCTGTT GCAGGGCTAC CTGCCACTCA ACCCTCAGAA CCTGCCTGGC
CAGGAATGGT CACTGGCGTT CAACACCGCC GTCAGTTTCG TTACCAACAC CAACTGGCAG
GCCTACAGCG GTGAGGCGTC GGTCAGCTAC CTGAGCCAGA TGCTTGGCCT GACCGTGCAG
AACTTTGTCA GCCCTGCCAC CGGCCTGGCC GTACTGGTTG TCCTGTGCCG CGGTATCGCC
CGGCGCAGCG CGACGACGCT GGGCAACTTC TGGGTCGACA TGACCCGTGC CACCCTCTAC
GGCCTGCTGC CGCTTTGCTT GCTGCTGGCG CTGCTGCTGG TATGGCAGGG CGTACCGCAG
ACCTTTGCCG ACTACGCCCA CGCGCTGACC TTGCAAGGGG CCGACCAGAC CATTCCGCTG
GGGCCGGCCG CCAGCCAGAT CGCCATCAAG CAGCTGGGTA CCAATGGCGG TGGCTTCTTC
GGCGTCAACT CGGCGCACCC GTTCGAAAAC CCAACGGCCT GGAGCAACCT GTTCGAGGTG
GCATCGATCA TCCTCATTCC AGTGGCATTG GTGTTCACCT TCGGTCACTA CGTGAAGGAC
CTGCGTCAGA GCCGCGCCAT CCTCGCCTGC ATGCTTGCCC TGTTCCTGAT CGGTGGCAGC
ACGGCGCTGT GGTCCGAGCA TCAGCCGAAC CCGGCCCTGG AAAGCACGCA GGTGCAACAG
ACCGCCCCTC TGGAGGGCAA GGAAAGCCGC TTCGGTACCA CCGGTTCGGT GCTGTGGGCG
GTCACCACCA CCGCTGCCTC CAACGGTTCG GTCAACGCCA TGCACGACAG CCTGAACCCG
CTGACCGGTA TGGTGGCGAT GGTCAACATG ATGGTCGGCG AGGTGATATT CGGCGGCGTC
GGCGCGGGCC TCTACGGCAT GCTGCTGTTC GTCCTTATCG CGGTGTTCCT GGCCGGGCTG
ATGATTGGCC GTACCCCGGA ATACCTGGGC AAGAAGCTGC AGGCCCGTGA AGTGCAGCTT
CTGGTGGCAA CCCTGCTGGT GATGCCGGTT GGCGTGCTGG TACTTGGCGC CATCGCCGCC
AGCCTGCCCG GCCCGGCCGG GGCGGTCACC AACCCGGGGG CGCATGGTTT CAGCCAGTTG
CTGTACGCCT ATACCTCGGG CTCGGCCAAC AACGGCTCGG CCTTTGCCGG GTTTGGCGCC
AACACCGTGT ACCACAACCT GATGATCGGC CTGGCCATGC TCATCGGCCG CTTCGGCTAC
ATCCTGCCGA TACTGGCGTT GGCCGGCAGC CTGGCGGCGA AAAAAAGCGC GCCGCTGGGG
CAGAACAGCT TCCCGACTCA CGGCCCGCTG TTCACCGGCT TGCTGCTGGT GACCATCCTG
CTGGTCGGTG GCCTGACCTT CCTGCCGACC CTGGCCCTTG GGCCAATCGC CGAACACCTT
AGCTTGGGTT TTTGA
 
Protein sequence
MHSYDFALLL AFFVIVLLPA PWLGRFYYKV MEGQRTWLTP VLGPVEQGCY RLAGVNASQE 
QNWRQYTLAL LAFNLVGFLL LFAVLLLQGY LPLNPQNLPG QEWSLAFNTA VSFVTNTNWQ
AYSGEASVSY LSQMLGLTVQ NFVSPATGLA VLVVLCRGIA RRSATTLGNF WVDMTRATLY
GLLPLCLLLA LLLVWQGVPQ TFADYAHALT LQGADQTIPL GPAASQIAIK QLGTNGGGFF
GVNSAHPFEN PTAWSNLFEV ASIILIPVAL VFTFGHYVKD LRQSRAILAC MLALFLIGGS
TALWSEHQPN PALESTQVQQ TAPLEGKESR FGTTGSVLWA VTTTAASNGS VNAMHDSLNP
LTGMVAMVNM MVGEVIFGGV GAGLYGMLLF VLIAVFLAGL MIGRTPEYLG KKLQAREVQL
LVATLLVMPV GVLVLGAIAA SLPGPAGAVT NPGAHGFSQL LYAYTSGSAN NGSAFAGFGA
NTVYHNLMIG LAMLIGRFGY ILPILALAGS LAAKKSAPLG QNSFPTHGPL FTGLLLVTIL
LVGGLTFLPT LALGPIAEHL SLGF