Gene PP_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4130 
SymbolnuoM 
ID1042273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4668126 
End bp4669658 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content63% 
IMG OID637147531 
ProductNADH dehydrogenase subunit M 
Protein accessionNP_746249 
Protein GI26990824 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGC CTTGGCTGAT CCTGATCCCC TTCATCGGCG GCTTCCTCTG CTGGCTGGGT 
GAGCGCTTCG GCGCCACCCT GCCGCGCTGG ATCGCGCTGC TTACCATGTC CCTGCTGCTT
GGCATCGGCC TGTGGCTGTG GGGTACCGGC GACTACACCC TTGCTCCCGC CCCGGGCGCC
GAACCGGCCT GGGCTCTCGA ATACAAAGTC GAGTGGATCA AGCGTTTCGG CATCAGCATC
CACCTGGCCC TGGACGGCCT GTCGCTGCTG ATGATCCTGC TCACCGGCCT GCTCGGTGTG
CTGTCGGTAC TGTGTTCCTG GAAAGAGATC CAGCGCCACG TCGGCTTCTT CCACCTCAAC
CTGATGTGGA TCCTCGGCGG CGTGGTCGGT GTGTTCCTGG CCCTGGACCT GTTCCTGTTC
TTCTTCTTCT GGGAAATGAT GCTGGTGCCG ATGTACTTCC TCATCGCGCT CTGGGGTCAC
AGCTCGGCAG ACGGCAAGAA GACCCGGATC TACGCGGCGA CCAAGTTCTT CATCTTCACC
CAGGCCAGCG GCCTGATCAT GCTGGTGGCG ATCCTGGGCC TGGTGCTGGT CAACTACAAC
ACCACTGGCG TGCTCACCTT CAACTACAGC GACCTGCTCA AGGCCGAGTT GCCGGCCGGT
ATCGAGTACG TGCTGATGCT GGGCTTCTTC ATCGCCTTCG CGGTGAAGCT GCCAGTGGTG
CCGTTCCACT CCTGGCTGCC TGACGCTCAC GCCCAGGCAC CGACCGCAGG CTCGGTGGAC
CTGGCGGGTA TCTTGCTGAA GACCGCGGCC TACGGCCTGC TGCGCTTCGC TCTGCCGCTG
TTCCCGAACG CCTCGGCCGA GTTCGCGCCG ATCGCCATGA CCCTGGGCCT GATCGGTATC
TTCTACGGTG CCTTCCTGGC CTTCGCACAA ACCGACATCA AGCGCCTGAT CGCCTTCTCC
AGCGTCTCGC ACATGGGCTT CGTGCTGATC GGTATCTACT CCGGCAGCCA GCAGGCCCTG
CAAGGTGCGG TGATCCAGAT GCTGGCCCAC GGCCTGTCGG CTGCGGCGCT GTTCATCCTG
TCCGGCCAGC TGTACGAGCG CCTGCACACC CGTGACATGC GTCAGATGGG TGGCCTGTGG
CACCGCATCG CCTACCTGCC GGCCATCAGC CTGTTCTTCG CAGCGGCATC GCTGGGCCTG
CCAGGCACCG GCAACTTCGT CGGCGAGTTC CTGATCCTGA TCGGCAGCTT CGTGCATGTA
CCGTGGATCA CCGTGATCGC CACTACCGGC CTGGTGTTCG GTTCTGTTTA CTCGCTGATC
ATGATCCACC GTGCCTACTT CGGCCCGGCC AAGACCGACA CCGTGCTGGC CGGCATGGAC
GGTCGCGAAC TGATCATGGT TCTGGGTCTG GCGGTATTGC TGATCCTGCT GGGCGTGTAT
CCGCAGCCGT TCCTCGACAC CTCTGCCGCC ACCATGAGTG GTGTGCAGCA GTGGCTCGGA
TCCGCTTTCA CTCAACTCGC TTCGGCCCGG TAA
 
Protein sequence
MILPWLILIP FIGGFLCWLG ERFGATLPRW IALLTMSLLL GIGLWLWGTG DYTLAPAPGA 
EPAWALEYKV EWIKRFGISI HLALDGLSLL MILLTGLLGV LSVLCSWKEI QRHVGFFHLN
LMWILGGVVG VFLALDLFLF FFFWEMMLVP MYFLIALWGH SSADGKKTRI YAATKFFIFT
QASGLIMLVA ILGLVLVNYN TTGVLTFNYS DLLKAELPAG IEYVLMLGFF IAFAVKLPVV
PFHSWLPDAH AQAPTAGSVD LAGILLKTAA YGLLRFALPL FPNASAEFAP IAMTLGLIGI
FYGAFLAFAQ TDIKRLIAFS SVSHMGFVLI GIYSGSQQAL QGAVIQMLAH GLSAAALFIL
SGQLYERLHT RDMRQMGGLW HRIAYLPAIS LFFAAASLGL PGTGNFVGEF LILIGSFVHV
PWITVIATTG LVFGSVYSLI MIHRAYFGPA KTDTVLAGMD GRELIMVLGL AVLLILLGVY
PQPFLDTSAA TMSGVQQWLG SAFTQLASAR