| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4078 |
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| Symbol | |
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| ID | 1042176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4606312 |
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| End bp | 4607328 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147484 |
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| Product | hypothetical protein |
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| Protein accession | NP_746203 |
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| Protein GI | 26990778 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0252169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00001492 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCATC CAGACCGGCA AGCAACCGCT GATCTAGCCG ACAAGCTGCT CGCCAACGCG
CACCAGTACA ACTTCTTCCA GTTGCTGGAG CGGTTGCATG GCCTGCACGG CGACGACCTG
GAACCGCGTT GGGCGGATGA GGCCACCCGG CTGCGCGTGC GGCTGGCCAG CGACCCGCGC
CTGACCTTTC CCGTCTCTGA TGTGTACAAG GCCGAGCGGA TGCCCGGGGA GGATGAGCGC
TATCGCGTGT GCACCACGTT CATGGGGCTG CACGGTACCG ACTCGCCCTT GCCCACCTAT
TACCTGGAAC AGGTGGCCTA TGAACATGCC CAGGGTGTAG GCGTGCGGCC GGCCTTCTTC
GACTTCTTCA ACCATTACCT GCTCAGCCTG CTGCACCGGA TCTGGCGCAA GTACCGCTAT
TACATCCGTT TTCAACCCGG TGCGCGGGAC GGGTTCTCCC AGTACATGTT CGCCCTGCTC
GGGCTGAACG ACAAACAGCT GCGCGGCGAC ACGACACTGC CCTGGAGCCG CCTGCTCAGC
TTTGCCGGTG TTATCGCCAG CCGCGGCCGC GCACCGGGGA CCGTCGCCGG CATCATCGCC
CACTGCTTCG ATCTGACGCA CGTGCAGATC CGCGAATTCG AGACGCGCAC GGTCACCACC
AACAGCAAAC AGCTTGTAAG CCTCGGGCGC AGCAACGGCG AGCTTGGCAG CACGTTCATG
GTCGGCAGCC GCACCCGCAC CCGCAGCAGC AAATTCACCA TCCTCATCAG CGAACTCGAC
CAGGCGCAGC TGCATGACTT GCTGCCCAGC GGCATCAACT TCGGACGCTT GCGCGCCTTG
ATTGATTTTC TGCTGCGCGA TGGCCTGGCG TATGACCTGG AGCTGCGCCT GAAACAAAAC
GCACTGTCGC CGTTCTACCT GCACCGCAGC CAAGGCGCCT ACCTGGGCTG GACCAGCTTC
GTCGATGACC ACGATGGCCA AATCAGTCCC GTTGTCCGCT TCCGGGGGCG GTCATGA
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| Protein sequence | MAHPDRQATA DLADKLLANA HQYNFFQLLE RLHGLHGDDL EPRWADEATR LRVRLASDPR
LTFPVSDVYK AERMPGEDER YRVCTTFMGL HGTDSPLPTY YLEQVAYEHA QGVGVRPAFF
DFFNHYLLSL LHRIWRKYRY YIRFQPGARD GFSQYMFALL GLNDKQLRGD TTLPWSRLLS
FAGVIASRGR APGTVAGIIA HCFDLTHVQI REFETRTVTT NSKQLVSLGR SNGELGSTFM
VGSRTRTRSS KFTILISELD QAQLHDLLPS GINFGRLRAL IDFLLRDGLA YDLELRLKQN
ALSPFYLHRS QGAYLGWTSF VDDHDGQISP VVRFRGRS
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