| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4077 |
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| Symbol | |
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| ID | 1042174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4604582 |
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| End bp | 4606348 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147483 |
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| Product | hypothetical protein |
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| Protein accession | NP_746202 |
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| Protein GI | 26990777 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0270196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000124343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCACTGA AGGACAGATT CAGCGAAGAA CTGCGTTACC TGCACGAGTT GGGAAACGAC
TTCGCCAAGG ACAACCCCCA GCTTGCCCGG CTGCTAGGCA AGGCGGGCAG CGACCCCGAT
GTCGAGCGGT TGATGGAAGC CTTTGCGTTT CTAACGGCCA AGCTTCGGCT GAAGCTGGAA
GATGACCTGC CAGAACTCAC CCACCCCATG CTGCAGATAC TGTGGCCCAA CTACCTGCGC
CCATTGCCCA GCGCCACGAT TATCCGATTC TCGCCACGCA AACAATCGCT CAGCCAGTCA
CAGCACATTC CCAAAGGTGC AAGGTTGTTC TCGAAACCCG TGGACGCCGT GCCCTGCGAG
TTTCGTACCT GCACGGGAGT GAGCCTTCAT CCGTTTGAAA TCAGCGCCGT CAGCGCAACC
CAGACACTCG ACAGCTCTGT GGTTCGCATC GGCCTGCAAA CCTTGGTCGA ACGGCCCCTG
AATACGTTGG GCTGCGCCCG TCTGGATTTC CACCTCAGCG GCGACAACCG CACCGCTCTG
ACGCTTTATC TATGGATTTC TCAATACCTC AAACACGTCA GCGTGATCAT GAACGGCGAG
GTGCGCCGGC TACCGGCCAA CAGCATCGGG TTCCCAGGTT TCAGCCCTGA GGAGGCCTTG
CTGCCCTACC CGCAGAACGT GTTCGATGGC TACCGTATTC TGCAGGAATA CTTCGTGTTC
CCGAAGCGCT TCCACTTCTT CAGCATTACC GGCCTGGAAA AGCTGTGGCC GGCACAAGCC
TGCCCACAGG TGGGCATCGA GTTCCATTTC ACGCGTCAAC TGCCAGACAC CCTTCGCGTT
GGCACAGAAG ATTTCAGCCT GTTCTGCACC CCGGCTGTCA ACCTGTTCAA GCACAGTGCC
GAGCCCATCG ACCTGGCCAG CGAGGCTGCC CAGGTCGAGC TGAAGCCCAG AAGCGAGGCG
CAGTCCGCTT ACGAAATCTT CAGTGTCGAT GAAGTCATCA GCACCCGAAC AACCACTGAC
GGAAGTACCG GTGAGCACCT GCGGACTTTT CGCCCTTTCG AATCGTTCGC CCACGAAATC
GAGCATGTCC AAGGCCGCAC GGCGCTGTAC TACCGCTGCC AACTTGAAGC GTCCCTGCGC
GGCGATGGCG TGACCCACCG CATCGCCTTC GTGCGCGCCG ATGCCAACAG CTACATAGGC
GAGCTTGAAA CTGCATCCAT CGACCTGACC TGCACCAACA GGGACTTGCC GCTGGCGCTG
GGCGTGGATG ACATCAACGT CCTCACCGAA GTCACGCCGC CCCTGGCGAC CTATACCAAC
ATCTGCGCCC CCACCCGCCC CTACCGGCCC GTGCTGGATG GCCAGTTGCA GTGGGCGTTG
ATCTCCAACA TGTCGCTCAA CTACCTGTCG CTGTTGTCGG TCGAGCCGCT CAAGGCGGTG
ATTCGCACCT ACGACTTCGC GGCGTTGCAC GACATCCAGC AAGCGCGCAC CACCGGCAAA
CGCCTCGACG GTATCCGCGA ACTCCACACG CAGCCCATGG ACTGGCTGAT CAAGGGGCAA
CCCATACGAG GCCTGCACAC CCAACTGAAG CTGGACCAGG CGGCCTTCCT CTGCGAAGGC
GACCTCTACC TGTTCGGCTG CGTGCTCGCG CACTTCTTCG CCCTGTACGC CAGCATCAAT
TCCTTCCATC AACTGGAAGT GATCAACACC ACCAACAACG AGCACTACAC ATGGCCCATC
CAGACCGGCA AGCAACCGCT GATCTAG
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| Protein sequence | MSLKDRFSEE LRYLHELGND FAKDNPQLAR LLGKAGSDPD VERLMEAFAF LTAKLRLKLE
DDLPELTHPM LQILWPNYLR PLPSATIIRF SPRKQSLSQS QHIPKGARLF SKPVDAVPCE
FRTCTGVSLH PFEISAVSAT QTLDSSVVRI GLQTLVERPL NTLGCARLDF HLSGDNRTAL
TLYLWISQYL KHVSVIMNGE VRRLPANSIG FPGFSPEEAL LPYPQNVFDG YRILQEYFVF
PKRFHFFSIT GLEKLWPAQA CPQVGIEFHF TRQLPDTLRV GTEDFSLFCT PAVNLFKHSA
EPIDLASEAA QVELKPRSEA QSAYEIFSVD EVISTRTTTD GSTGEHLRTF RPFESFAHEI
EHVQGRTALY YRCQLEASLR GDGVTHRIAF VRADANSYIG ELETASIDLT CTNRDLPLAL
GVDDINVLTE VTPPLATYTN ICAPTRPYRP VLDGQLQWAL ISNMSLNYLS LLSVEPLKAV
IRTYDFAALH DIQQARTTGK RLDGIRELHT QPMDWLIKGQ PIRGLHTQLK LDQAAFLCEG
DLYLFGCVLA HFFALYASIN SFHQLEVINT TNNEHYTWPI QTGKQPLI
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