| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4068 |
|---|
| Symbol | |
|---|
| ID | 1045706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4593990 |
|---|
| End bp | 4594694 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637147475 |
|---|
| Product | Cro/CI family transcriptional regulator |
|---|
| Protein accession | NP_746194 |
|---|
| Protein GI | 26990769 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0144241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000065299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTG AGCGCTTGAA GGCAGTCCGT ATCGTGCCAG CGATGAATAT GGATAAATGG
ATTGCCCTCG TCCGTGACCG GATGGAGGAG CTAGGGCTCA CTCAAGAGCA GCTTGCCGAG
CGCGTTGGTG TGTCTCAAGG CAGTGTCGGT CATTGGGTGA ACAAGCGGCG TCAGCCGAAA
ATCGAATCGA TGAACCGCAC GTTCGTCGAG CTTGGAATGC CTCATTACAA CGTCAGCCTG
CAGCTGCGTA TCCAGGGGCA GGTTGGCGAG GAGCGTAGTG TTTACGAGAT AGCAGACGAT
GATGAACTCG ACCTCATGCG GTACATCGTT TGCTTCCGTT ACCCGGTGCT GGGTTGGAGT
GAGTTAGAGG CTGCGACGGC TGTAGAGCCT GCTGTTTTCG AGCAGACTGA CTACCTGGCA
CAGGGCAAGG CGTTCTGGCT AACCGTGGAA AACGATGCCA TGAGCGCTGT CAGTGGCCGC
AGTGTGCCGC AGGGCATGCG AATGCTGGTG GACCCAGGTG TAGAGGCTGA GGCGGGGCGT
TTGGTTATCG CTCGTCAGCC GGGCAAGCCG GCGATTTTCC GCGAGCTGGC CGAGGAAGGT
GGGCAGCGTT ATCTGAAGGC ATTGAACAGT AACTACCCGG CGCTGTTGTG CGAAGAGGGT
TGCGAATTTC TTGGGGTGGT CGTGCGGGTG CATGGGGCTT TTTGA
|
|---|
| Protein sequence | MFIERLKAVR IVPAMNMDKW IALVRDRMEE LGLTQEQLAE RVGVSQGSVG HWVNKRRQPK
IESMNRTFVE LGMPHYNVSL QLRIQGQVGE ERSVYEIADD DELDLMRYIV CFRYPVLGWS
ELEAATAVEP AVFEQTDYLA QGKAFWLTVE NDAMSAVSGR SVPQGMRMLV DPGVEAEAGR
LVIARQPGKP AIFRELAEEG GQRYLKALNS NYPALLCEEG CEFLGVVVRV HGAF
|
|---|
| |