Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4035 |
Symbol | |
ID | 1045385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4545852 |
End bp | 4547342 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147444 |
Product | NCS1 nucleoside transporter |
Protein accession | NP_746163 |
Protein GI | 26990738 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA GCAGATCGGA AGTGGTCGAG CAAGATGGCC TGTTCGAGCT GTCCGAGGGC AGCGATGTCC TCGACAGCCC GCGCTACAAC CCCGACATAG CACCGACCAA GGTGCACCAG CGCACCTGGA ACAAATGGCA CATCACCGCC CTGTGGGTGG GCATGTCCAT CTGCGTACCC ACCTACACCC TCGGCGGCGT GCTCACCGCC TACTTCGGCC TCAGCGTTGG CGAAGCGCTG CTGGCGATTT TGCTGGCCAA CGTAATCGTG CTGATACCGC TTACCCTCAA TGCCTTTCCC GGCACCAAGT ACGGCATCCC GTTTCCGGTG CTGCTGCGTT CGTCGTTCGG CATCCTCGGC TCCAACGTAC CGTGCCTGAT CCGCGCGGTG GTGGCCTGTG GTTGGTTCGG TATCCAGACC ATGTTTGGCG GGCTGGCCAT TCACCTGTTC CTGGGTTCGG TGTTCGACGG CTGGAAGGCG CTGGGCGGGA CAGGCGAGGT GATTGGCTTC ATGATCTTCT GGTGCCTGAA CCTGTGGGTG GTGCTGCGCG GCGCCGAGTC GATCAAGTGG CTGGAAACGC TGTCGGCACC GCTGCTGGTG GCAGTGGGCG TCGGTCTGCT GTTCTGGGCC TTGCCGCACA TGTCGATGAC CGAACTGTTG GCGCAGCCGC CCAAGCGTCC GGAAGGGGCG AGCGTGGTCA GTTACTTCTG CGCCGGGCTT ACGGCCATGG TGGGCTTCTG GGCCACACTG TCGCTGAACA TTCCCGACTT CAGCCGCTAC GCCCGCAGCC AGAAGGATCA GATTCTCGGG CAGATCTTCG GCCTGCCGCT GACCATGTTC CTGTTCGCTG CGCTGGGTGT GGTGCTGACC GCCGCTTCGG CGTCGCTGGT GGGCGAGACG GTGTCCGACC CGGTCAGCCT GATCGGCAAG ATTCAAAGCC CGTTCTGGGT GGCCCTGGCC ATGGCGCTGA TCGTGATCGC CACGCTGTCG ACCAACACCG CGGCGAACAT CGTGTCGCCT ACCAATGACT TCCAGAACAT TGCCCCACGC CTGATCGGCC GAAGCCGCGC GGTATGGCTG ACCGGCTTTA TCGGCCTGGC GCTGATGGGG CATGAACTGC TGAAGAAACT GGGCCTGATT GTCTCCGACC TTAGCCTGGA GAGCGTGTAT TCCAACTGGC TGCTGGGCTA TTCCAGCTTG TTGGGGCCCA TTGCCGGCAT CATGGTGGTG GACTACTTCC TGATCCGTCG GCAGAAGCTG GACCTGGCCG GGCTATACCG CGACGACGTG TATCCCGCGT GGAACTGGGC CGGTTTTGCC GCCTTCGCCT TGCCAGTAGG GCTGACGGTA ATGGCGATTG GCAACAGCAG TTTCAGCTGG TTCTACGACT ATGGCTGGTT CACCGGCTCG TTGCTGGGCG GTGCACTGTA CGCCGCGCTT GGCGGTTTGG CGGCACGCAA CCCGGTGCGG TTGGCCAAAC CCTTGCCTTG A
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Protein sequence | MQQSRSEVVE QDGLFELSEG SDVLDSPRYN PDIAPTKVHQ RTWNKWHITA LWVGMSICVP TYTLGGVLTA YFGLSVGEAL LAILLANVIV LIPLTLNAFP GTKYGIPFPV LLRSSFGILG SNVPCLIRAV VACGWFGIQT MFGGLAIHLF LGSVFDGWKA LGGTGEVIGF MIFWCLNLWV VLRGAESIKW LETLSAPLLV AVGVGLLFWA LPHMSMTELL AQPPKRPEGA SVVSYFCAGL TAMVGFWATL SLNIPDFSRY ARSQKDQILG QIFGLPLTMF LFAALGVVLT AASASLVGET VSDPVSLIGK IQSPFWVALA MALIVIATLS TNTAANIVSP TNDFQNIAPR LIGRSRAVWL TGFIGLALMG HELLKKLGLI VSDLSLESVY SNWLLGYSSL LGPIAGIMVV DYFLIRRQKL DLAGLYRDDV YPAWNWAGFA AFALPVGLTV MAIGNSSFSW FYDYGWFTGS LLGGALYAAL GGLAARNPVR LAKPLP
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