| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4033 |
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| Symbol | |
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| ID | 1043330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4543563 |
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| End bp | 4544522 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637147442 |
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| Product | ribonuclease Z |
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| Protein accession | NP_746161 |
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| Protein GI | 26990736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.299532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC TGTTCCTTGG CACCTCCGCC GGGGTGCCCA CCAAGGCACG CAATGTCAGC
GCCACAGCCG TGATCGAAGC CAGCGGCAGC CACTGGTATC TGGTCGATTG CGGCGAAGGC
ACCCAGCACC GCCTGCTGCA CACCCCGCTT TCGATCCGCG ACCTGCGCGC GATCTTCATC
ACCCACGTGC ATGGTGACCA TTGCTTCGGC CTGCCCGGCC TGCTGGCCAG CGCGGGCATG
AGCGGGCGCA CCCAGCCGCT GGAAGTGATC CTGCCCGCCG TACTGCACGA CTGGGTACGC
CAGGGCCTGG TTGCCAGCGA CACCTTCCTG CCGTTCGAGC TGCGCCTGTT GCCCGTGGAA
GAGCTGATCG CATGGCGCAG CGAGACCCTG CAGGTGACCA CCGTGCAACT GTCGCACCGG
GTGCCCAGCG TGGGTTTCGT ATTCACCGAA ATCAACCCTG AGCCACGCCT GGACATCCAG
CGCCTGGACG CCGAGGGCAT AACGCGTGGT CCGCTGTGGG GCGAGCTGGC CAAGGGGTTG
ACCGTGACGT ACGACGGGCA ACTGCTGAAC GGCAACGACT ACCTGCGCCC TTCGCGTCCG
CCCCGGCGGG TGATCGTGTG CGGGGACAAC GACAAGCCAG AACTGCTGGC AGCCGTCGCC
AGGGGTGCGG ATGTACTGGT GCACGAAGCC ACCTTCACCC AGGCGGTGGT CGAACGCACC
GGGGGCACGT TCGGCCACAG CACCGCCGCT GAGGTGGCAC GCTTTGCCGA GGCCGCTGGC
GTGCGCAACC TGGTACTGAC GCATTTCAGC GCCCGCTACC AGAACGACCC ACGGCGCAGC
CCGCACATCG ACAACGTGCG CGACGAGGCC CTCGCCCATT ACAGCGGGCA GTTGACCCTG
GCGCAGGACC TGCAGCGCTA TCACCTTGGC CGTAACGGCC TTCTTGAGGC CAGTGCCTAG
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| Protein sequence | MDLLFLGTSA GVPTKARNVS ATAVIEASGS HWYLVDCGEG TQHRLLHTPL SIRDLRAIFI
THVHGDHCFG LPGLLASAGM SGRTQPLEVI LPAVLHDWVR QGLVASDTFL PFELRLLPVE
ELIAWRSETL QVTTVQLSHR VPSVGFVFTE INPEPRLDIQ RLDAEGITRG PLWGELAKGL
TVTYDGQLLN GNDYLRPSRP PRRVIVCGDN DKPELLAAVA RGADVLVHEA TFTQAVVERT
GGTFGHSTAA EVARFAEAAG VRNLVLTHFS ARYQNDPRRS PHIDNVRDEA LAHYSGQLTL
AQDLQRYHLG RNGLLEASA
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