| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3999 |
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| Symbol | cobA-2 |
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| ID | 1046563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4507388 |
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| End bp | 4508779 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637147410 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | NP_746129 |
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| Protein GI | 26990704 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.426226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00756787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTACC TGCCGCTGTT CCACAAGCTG CAGGGCGGCC GCGTGCTGGT CGTCGGTGGC
GGTGAGATCG CCTTGCGCAA GGCGCGCCTG CTGGCCGATG CCGGCGGCGT GCTGCGCGTG
GTGGCGCCGG ACGTCGACGG CCAGTTGGCC GCGTTGGCCC GGGAAGGTGG CGGTGAGGTG
CTGGTGCGTG GCTATCAGGC AGCCGACCTG GTCGGTTGCC GGCTGGTGAT CGCGGCGACT
GACGACCCTG GGCTGAATGC CCAGGTGTCG GCCGATGCGC AGGCCCTTAG CCTGCCGGTC
AATGTGGTGG ATGCGCCGGC CCTGTGTACG GTGATCTTCC CGGCGATCGT GGACCGTTCG
CCGCTGGTAA TCGCTGTTTC CAGCGGCGGT GACGCCCCGG TACTGGCACG CCTGATTCGA
GCCAAGCTCG AGGCGTGGAT CCCTTCGGCC TATGGTGAGC TGGCCGGGCT GGCTGCACGC
TTCCGGCACA AGGTCAAATC CCTGTACCCG GACGTCAACC AGCGTCGCGG CTTTTGGGAA
ACCGTGTTCC AGGGGCCGAT CGCCGAGCGT CAGCTGGCCG GGCAGGGGGC TGAAGCCGAA
CGTCTGTTGC AGGCGATGGT GGACGGCGCA CCGGTGCAGC AGGGTGGTGA GGTGTACTTG
GTTGGTGCAG GCCCGGGTGA TCCGGACTTG CTGACCTTCC GTGCCTTGCG CCTGATGCAG
CAGGCCGACG TGGTGCTGTA CGACCGCCTG GTCGCACCCG CCATCATCGA TATGTGTCGT
CGTGATGCCG AGCGCATCTA TGTAGGCAAG CGCCGCGCTG ATCATTCAGT GCCGCAGGAC
CAGATCAACC GCCTGTTGGT CGATCTGGCT CGGCAGGGCA AGCGGGTGCT GCGCCTGAAG
GGTGGCGACC CGTTCATCTT CGGCCGGGGC GGCGAAGAGA TCGAAGAGCT GGCCGAGCAT
GGCATTCCGT TCCAGGTGGT GCCAGGCATT ACGGCGGCCA GCGGCTGCTC CGCGTATGGC
GGCATTCCGC TGACTCACCG CGACTATGCC CAGTCGGTGC GCTTCGTCAC CGGGCACCTC
AAGGACGGCA CCAGCAACCT GCCTTGGAAT GACCTGGTGG CGCCGGCGCA GACCTTGGTG
TTCTACATGG GCTTGGTGGG CTTGCCGACC ATCTGTGCCG AGCTGATTCG CCACGGGCGC
GCCGCGAGTA CCCCGGCGGC GTTGGTGCAG CAGGGGACCA CGCGTAATCA GCGCGTGTTC
ACCGGCACCT TGGCGGACTT GCCAGACCTG GTGGCCCAGC ATGAGGTGCA TGCGCCGACC
CTGGTGATTG TGGGGGAAGT GGTGCAGTTG CGTGACAAGC TGGCCTGGTT CGAAGGTTCG
CAGAACAGCT GA
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| Protein sequence | MDYLPLFHKL QGGRVLVVGG GEIALRKARL LADAGGVLRV VAPDVDGQLA ALAREGGGEV
LVRGYQAADL VGCRLVIAAT DDPGLNAQVS ADAQALSLPV NVVDAPALCT VIFPAIVDRS
PLVIAVSSGG DAPVLARLIR AKLEAWIPSA YGELAGLAAR FRHKVKSLYP DVNQRRGFWE
TVFQGPIAER QLAGQGAEAE RLLQAMVDGA PVQQGGEVYL VGAGPGDPDL LTFRALRLMQ
QADVVLYDRL VAPAIIDMCR RDAERIYVGK RRADHSVPQD QINRLLVDLA RQGKRVLRLK
GGDPFIFGRG GEEIEELAEH GIPFQVVPGI TAASGCSAYG GIPLTHRDYA QSVRFVTGHL
KDGTSNLPWN DLVAPAQTLV FYMGLVGLPT ICAELIRHGR AASTPAALVQ QGTTRNQRVF
TGTLADLPDL VAQHEVHAPT LVIVGEVVQL RDKLAWFEGS QNS
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