| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3992 |
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| Symbol | |
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| ID | 1046571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4502371 |
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| End bp | 4503750 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147403 |
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| Product | xanthine/uracil permease family protein |
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| Protein accession | NP_746122 |
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| Protein GI | 26990697 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.92577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00216246 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTCAC ACGAACACAG CCCAGGCGCA GGGGCGCCTG CCAATGAACT GGTGCTTGGT
CTGGAGGACA AGCCACGGCT GTTGATCGGC CTGCTGGCAG CCCTGCAGCA CCTGCTGGCG
ATCATCGTGC CGATCGTCAC CCCTGGCCTG CTGATCTGCC AGGCGTTGGG TGTATCTGCA
CGTGATACCA ATTTGATCGT TTCGATGTCG CTGGTGATCT CGGGTATCGC CACCTTCGTC
CAGTGCAAAC GCTTCGGCCC ATTTGGCGCG GGGCTGCTGA TCGTTCAGGG CACCAGCTTC
AACTTCGTCG GCCCGCTGAT TGCCGGCGGT GCGCTGATGG TCAAGCAAGG CACGCCGGTT
GAAGGCGTAA TGGCAGCCAT TTTTGGCGTA GTAATCGCGG GCTCGTTCGT CGAGATGGGC
GTGTCGCGCA TCCTGCCCTT CGTCAAACGC CTGATCACCC CGCTGGTGAC TGGCATCGTG
GTGTTGATGA TCGGCCTGAC GCTGATCAAG GTCGGCCTGA TCAGCATGGG CGGTGGCTTT
GGTGCCATGG CCAATGGCAC CTTTGCCAAT GGCGAAAACC TGCTGATGTC GGGCGTGGTA
CTGGCGATCA TCGTCGTTCT CAACCGTATC CCGGTGGTGT GGATGCGCAG CTGCGCCATC
GTCATCGCCC TGGCGGTCGG CTATGCGCTG GCCGGATACC TGGGCCGCCT GGACTTTACC
GGCATGCACG AGGCCGCGCT GTTCCAGGTG CCGACACCGC TGCACTTTGG CCTGGGCTTC
TCGTGGGCGC TGTTCATTCC GATGCTGGTG ATCTACCTGG TCACTTCGCT GGAAGCCATC
GGTGACGTTA CCGCCACCAG CAAGGTGTCG CGCCAGCCGG TCGAAGGGCC GATGTGGATG
CAGCGGATCA AGGGGGGCGT GCTGGTCAAC GGCGCCAACT CGCTGCTGGC CGGTCTGTTC
AACACCTTCC CTAGCTCGAT TTTTGCCCAG AACAACGGGG TGATTCAGCT GACCGGTATT
GCCAGCCGTC ATATCGGTAT GTGGATTGCC GTGATGCTGG TGTTGCTGGG TCTGTTCCCG
AGTGTTGCCG GGGTGATTCA GGCCGTGCCG GAGCCGGTGC TGGGCGGCGC GGCGATGGTC
ATGTTTGGTG CGGTTGCGGC GTCGGGGATC AATATTCTGG CCAGCACCCG GCTGGACCGT
CGGGCGCTGC TGATTATTGC CGTGTCGTTG GCACTGGGCC TGGGTGTGGC GCAGGTGCCA
GAGTTCCTGG CGCACATGCC GGCGGCGATT CGCAATGTGC TGGAGTCGGG TGTGGCTACC
GGGGGGATTT GTGCGCTGGT GCTGAACTGG TTCTTGCCGG AGGGCAAGGA GCAGGCTTGA
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| Protein sequence | MSSHEHSPGA GAPANELVLG LEDKPRLLIG LLAALQHLLA IIVPIVTPGL LICQALGVSA
RDTNLIVSMS LVISGIATFV QCKRFGPFGA GLLIVQGTSF NFVGPLIAGG ALMVKQGTPV
EGVMAAIFGV VIAGSFVEMG VSRILPFVKR LITPLVTGIV VLMIGLTLIK VGLISMGGGF
GAMANGTFAN GENLLMSGVV LAIIVVLNRI PVVWMRSCAI VIALAVGYAL AGYLGRLDFT
GMHEAALFQV PTPLHFGLGF SWALFIPMLV IYLVTSLEAI GDVTATSKVS RQPVEGPMWM
QRIKGGVLVN GANSLLAGLF NTFPSSIFAQ NNGVIQLTGI ASRHIGMWIA VMLVLLGLFP
SVAGVIQAVP EPVLGGAAMV MFGAVAASGI NILASTRLDR RALLIIAVSL ALGLGVAQVP
EFLAHMPAAI RNVLESGVAT GGICALVLNW FLPEGKEQA
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