Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3950 |
Symbol | |
ID | 1046614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4454806 |
End bp | 4456983 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147360 |
Product | methyl-accepting chemotaxis transducer |
Protein accession | NP_746080 |
Protein GI | 26990655 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.691578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAGA TAATGTCGCT TTCCAGTGGT TCGATGCAGT TATCGTCGAG TGAAAAGGGC TGGCTGCCGT GGTTCGGCAA AACCGGCAAA TTCAGCATGG GCTGGGCGTG CCGCCTTAAC CGGGCCAGTT ACCCGCAGGT CGAGCAAACC TTCGAAGCCA TCGCCCAGAC CCGAGTGCAG TTGCTGCATG AGTGGGTGCG CGAACAGTGG GAGCACCTGG CCGACCTGGC CGAGCAGGTG GCGCCCGGGC TCGCTCAAGT CGATAGCGCG ATGTTGCGCA ACACGCTGGC CCAGGCGGAG GACTTTTCCG AACTGTTTGT CGTCGATGTG CACGGCAGCG TCACCGCTTC GACCTGGCCC CAGCGTGGCA CGCCACGTAT CGAGTATTTG GCAGCTCTGG CGCAGGGGCT GAAAGCACCG TTTCTGCACG GGCCCTACAG CGACTCGCTG ACCTTGCAGA TCGGCCCGTC TTCCTCGCGC TTCCACGATG AAGTCACGTT GATGTTCTAC CAGCCCCTCA TGCACGAGGG CAAAGTGCTG GGTTGTCTGT GTGGGCGGGT GCCCAACGAT GTGCTGGGTG ACCTGATCCA GCGCGAGGCA GGGCACATTT ACCCCGAGTC GGGCGACAAC TACCTGTTCA TGGCGCAATC GCGCTTCGAC CCTGGCATAC AGCCCGGTAC CGCGTTGTCC CGCTCGCGTT TCGAGGACGC CACTTTCACC CATGGCGAAA ACCTCAAGAA CGGTATGCAC ACGCCCTGGG CCACTGTACA GGTCCAGCGC CATACCGAGC TGGAGCTTCG TTTCACCGAC CCTTCCACGC GGGAACTGCA CCCTGGCGTG AGGGAGACGA TCAGGCGGGG TGCCAACCTG TTCGTGACCT ACCCCGGCTA TTCGGACTAC CGTCATGTGC CAGTGGTGGG CAAGGGCGTT ACCTTCCAGT TGCCGGGCTC GCCCGACCGC TGGGGCATGA TGTGCGAGGC GGACCTGGAG GAGGTCTACC GCCGGCGTTC GCTGAGCTAC GGGTTGATGA AACCCTATGT GGCGATCATG GCGGGGCTGT TCGGCTGCAA TTACCTGGTG CAGCACTATG CAGGCCTGCC GCAAGGACTG ACTGACGTGA TCGAGGCCTT GAGCATGCTG GGCGCCACCT TGTTGTTTGG CGTGCTCGGG CCCAAGCGCC TGGCCGCGAG GTTGAATGGT ATGAGCAGTG TGCTATGCAC CATCGCCGAG GGTGAAGGCA ACCTGCGCCA GCGCCTGGAT ACCAGCACCT TGGCCAATGA TGAGAGCGGC GACATGGCAC GCTGGATCAA CAGCTTCATC GACCGCCTGG ACGCGGTGGT CGGGCAGGTG GTCAAGGCCA GCCGCACGGT CGGCAGCACC AACCAGATGA TGCTCGGGCG CAGCCAGGAG GCCAGCGTAA GCTCCGCCGA CGTGGCCGAC GCCGTGCACC AGATGATGAT CATCATGGAA GAGCAACTCG GCGAACTGCA GCAGGCCTCG GTCAGCGCCG AGCAGATGAA GCAGGCCATG GACGAAGTGG TCAGCCGCGC ACGCGCGCAG TACCAGGCGG TGCAGGCGGG CACGCAGTCG ATCCGCGATG TGGTGGCGCG CTCATCATCC AGCGTGCAGC GGCTCGACAG CCGCATGGTC GAGATCGACA ACATCACCGG GTTGATCAGC GAAATCACCA ACCAGACCAA CCTGCTGGCG CTCAATGCCG CCATCGAGGC GGCGCGTGCC GGGGAGCATG GCCGTGGCTT CGCGGTGGTG GCCGACGAGG TGCGCAGCCT GGCCGCACGC ACCTCGCGTG CCGCCGACGA CATTCGCCAC ATGGTCGAGA GCCTGCAGGG CGAAACCCGG CAGGCGGTAA GCTTCATGGA GCAGGGCGTG CAGGACGTCG ACAACAGCCT GCGCCTGGCG GAGGACGCTT CTTCCGAAAA TGTACAGCTG CACCAGGCGG TGGAGAGCAT GTTCGCCATT ATCCAGCAGC TCAACCGTCG CAGCGTGGAA TACGGCAAGA CGATCGAGCA GGTCAACCAG TCCTCCAGCG AGATGCGCCA GACCGCCCTG GTGCTGCAAA GCAGTGCGCA GAAGGTGAAG GTGGATGCTG GCAAGTTGCA GAAGCTGGTG GGGCAGTTCG AAGTCAGTGA TGATGGCGAA CGAGGCGTCG CTGCTTGA
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Protein sequence | MVKIMSLSSG SMQLSSSEKG WLPWFGKTGK FSMGWACRLN RASYPQVEQT FEAIAQTRVQ LLHEWVREQW EHLADLAEQV APGLAQVDSA MLRNTLAQAE DFSELFVVDV HGSVTASTWP QRGTPRIEYL AALAQGLKAP FLHGPYSDSL TLQIGPSSSR FHDEVTLMFY QPLMHEGKVL GCLCGRVPND VLGDLIQREA GHIYPESGDN YLFMAQSRFD PGIQPGTALS RSRFEDATFT HGENLKNGMH TPWATVQVQR HTELELRFTD PSTRELHPGV RETIRRGANL FVTYPGYSDY RHVPVVGKGV TFQLPGSPDR WGMMCEADLE EVYRRRSLSY GLMKPYVAIM AGLFGCNYLV QHYAGLPQGL TDVIEALSML GATLLFGVLG PKRLAARLNG MSSVLCTIAE GEGNLRQRLD TSTLANDESG DMARWINSFI DRLDAVVGQV VKASRTVGST NQMMLGRSQE ASVSSADVAD AVHQMMIIME EQLGELQQAS VSAEQMKQAM DEVVSRARAQ YQAVQAGTQS IRDVVARSSS SVQRLDSRMV EIDNITGLIS EITNQTNLLA LNAAIEAARA GEHGRGFAVV ADEVRSLAAR TSRAADDIRH MVESLQGETR QAVSFMEQGV QDVDNSLRLA EDASSENVQL HQAVESMFAI IQQLNRRSVE YGKTIEQVNQ SSSEMRQTAL VLQSSAQKVK VDAGKLQKLV GQFEVSDDGE RGVAA
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