| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3939 |
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| Symbol | |
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| ID | 1046626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4441236 |
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| End bp | 4442528 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147349 |
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| Product | porin, putative |
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| Protein accession | NP_746069 |
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| Protein GI | 26990644 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.38519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0206091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGTT TCACTGCGCC GCGTTTTTCT TCGTCTGCAC GCCTGGCCGG CGGTTGTATT
GCCGCCGCTT TGTGTGCAGA GGCCACGGCA GAAGAGGCCG GTTTCATCGA AGGTGCCCGC
GCCACGCTGC AGGCGCGCAA TTACTTCTTC AGCCGCGACT ATGCCGATAT CAAGGGCGCC
AGCACCCAGT CGCGCACCCA GGAATGGGCG CAGGGGTTTA TCCTCAATGC CAGCTCCGGT
TATACCCAGG GCACCCTTGG CGTGGGTGTG GATGTTACCG GCCTGCTGGG TTTCAAGCTC
GACAGCAGCC CGGAACATGC CCGGTCCGGG TTGCTGCCCA GCCTGGACAG CGGCAAGTCG
GCGGACGAAT ACAGCCGCCT GGGTGCGGCG ATCAAGTTCA AGGTGTCGCA AACCGAGCTG
AAAGTGGGCG AGTTGATGCC CAACCTGCCG GTGCTGCTGT TCAGCGATTT GCGCCTGCTG
CCGCCGACAT ACCAGGGCGC GATGCTGGAG TCGCGCGAGT TCGCCGGGTT GACCCTGAGC
GCCGGCCAGT TCCGCTCCAC CAGCCTGCGC GACTCGTCCA ACAGCCAGAA GATGTACGCG
CTGGTCAACG ACCCGATCAA CCCGGCGCGG CTGGCGCGTT TTACCAGCGA CCGGTTCAAC
TACGTGGGTG CCGACTATGC CTTCAACGAC AACCGTACCA GCGTCGGTGT CTGGCAGGCG
CAGTTGGAGG ATATCTACCA GCAGCGCTTC TATAGCTTCA AGCATGCCGA GCCGCTGGGG
AGCTGGACGC TGGGGGTCAA TGCCGGCTAC TTCGATGCCC GCGAGGACGG GAGCAAGGTG
GCTGGCGACT ACGATAACCA TGCGCTGTTC AGCCTGTTCT CGGCCAAGAC CGGCGGGCAT
ACCTTTTATG TGGGCTATCA GCAGATCGGC GGCGATGACG GCTTTATCCA GGTAGGCGCC
AACACCAACC CGATGGGTAA TACGCTGCCG ACCTATGAGT TCTCGGCGCC GGGTGAACGC
TCGTGGCAGG TGCGACATGA TTACAATTTT GTCGCCTTGG GGCTTCCAGG GCTGACGTCG
ACCCTGCGTT ATGTGAAGGG GCGGGACGTG GAGACAGGGC TGGGCTTTGA AGGGCGTGAC
CGCGAGCGTG ACCTGGACCT GGCCTACGTC GTGCAAAGCG GGCCGTTGGC CGGGCTTGGG
ATACGGGTGC GCAATGTGAT GGCGCGCTCC AACTACCGGA CAGATATAGA TGAGAACCGC
TTGATTCTGA GTTACACGAT CAAGGTGTTC TGA
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| Protein sequence | MQGFTAPRFS SSARLAGGCI AAALCAEATA EEAGFIEGAR ATLQARNYFF SRDYADIKGA
STQSRTQEWA QGFILNASSG YTQGTLGVGV DVTGLLGFKL DSSPEHARSG LLPSLDSGKS
ADEYSRLGAA IKFKVSQTEL KVGELMPNLP VLLFSDLRLL PPTYQGAMLE SREFAGLTLS
AGQFRSTSLR DSSNSQKMYA LVNDPINPAR LARFTSDRFN YVGADYAFND NRTSVGVWQA
QLEDIYQQRF YSFKHAEPLG SWTLGVNAGY FDAREDGSKV AGDYDNHALF SLFSAKTGGH
TFYVGYQQIG GDDGFIQVGA NTNPMGNTLP TYEFSAPGER SWQVRHDYNF VALGLPGLTS
TLRYVKGRDV ETGLGFEGRD RERDLDLAYV VQSGPLAGLG IRVRNVMARS NYRTDIDENR
LILSYTIKVF
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